Basic Information
Locus ID:
gene_13203
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_12_Chr_6 | 35129766 | 35132270 | + | gene_13203 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.89 | 82,636.79 Da | 43.91 | 90.48 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 419 | 702 | 1.08236E-94 | - |
| Pfam | PF00560 | Leucine Rich Repeat | 255 | 276 | 0.1 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 415 | 699 | 4.0E-47 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 108 | 167 | 3.6E-10 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 84 | 104 | 1.3 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 18 | 330 | 6.12E-53 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 389 | 702 | 2.16E-73 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 493 | 726 | 3.5E-61 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 106 | 2.3E-24 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 397 | 492 | 2.8E-20 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 107 | 171 | 5.0E-20 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 172 | 353 | 2.8E-39 | IPR032675 |
| SMART | SM00220 | serkin_6 | 413 | 703 | 6.9E-29 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 413 | 728 | 36.583752 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 552 | 564 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_010669046.2 | receptor-like protein kinase HSL1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9SGP2 | Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LBI7 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology