Basic Information
Locus ID:
gene_13202
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Short Name:
CPK13
Description:
calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr08 | 130868106 | 130879052 | - | gene_13202 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.22 | 63,517.89 Da | 36.85 | 81.64 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 463 | 525 | 3.83611E-20 | IPR002048 |
| CDD | cd05117 | STKc_CAMK | 56 | 343 | 6.61189E-128 | - |
| Pfam | PF13499 | EF-hand domain pair | 462 | 525 | 6.4E-15 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 59 | 344 | 2.9E-69 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 390 | 450 | 3.0E-7 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 373 | 550 | 1.96E-44 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 44 | 364 | 3.1E-80 | IPR011009 |
| Gene3D | G3DSA:1.10.238.10 | - | 353 | 528 | 8.2E-53 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 58 | 142 | 4.3E-25 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 143 | 352 | 1.1E-56 | - |
| SMART | SM00054 | efh_1 | 499 | 527 | 8.5E-7 | IPR002048 |
| SMART | SM00054 | efh_1 | 463 | 491 | 5.0E-6 | IPR002048 |
| SMART | SM00054 | efh_1 | 427 | 455 | 8.8 | IPR002048 |
| SMART | SM00220 | serkin_6 | 57 | 344 | 3.4E-93 | IPR000719 |
| SMART | SM00054 | efh_1 | 391 | 419 | 4.2E-4 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 495 | 530 | 14.987627 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 459 | 494 | 15.378162 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 387 | 422 | 14.48551 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 57 | 344 | 45.742584 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 177 | 189 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 400 | 412 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 63 | 86 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 472 | 484 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 508 | 520 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 12 | 33 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 41 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51850.1 | calcium-dependent protein kinase 13. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_010253754.1 | PREDICTED: calcium-dependent protein kinase 13 [Nelumbo nucifera] | 0 |
| Q8W4I7 | Calcium-dependent protein kinase 13 OS=Arabidopsis thaliana OX=3702 GN=CPK13 PE=1 SV=2 | 0 | |
| TrEMBL | A0A1U7ZYL6 | calcium-dependent protein kinase 13 OS=Nelumbo nucifera OX=4432 GN=LOC104594903 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology