Basic Information
Locus ID:
gene_13202
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_12_Chr_6 | 35116927 | 35121289 | + | gene_13202 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.70 | 65,680.43 Da | 46.17 | 91.19 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 277 | 560 | 4.4617E-96 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 3 | 27 | 7.2E-4 | IPR013210 |
| Pfam | PF00560 | Leucine Rich Repeat | 113 | 135 | 0.073 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 273 | 557 | 3.9E-45 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 58 | 99 | 2.4E-6 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 17 | 203 | 2.61E-31 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 251 | 560 | 3.37E-72 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 255 | 350 | 8.5E-20 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 111 | 1.2E-24 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 351 | 582 | 1.9E-60 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 112 | 207 | 2.1E-19 | IPR032675 |
| SMART | SM00220 | serkin_6 | 271 | 561 | 2.4E-25 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 271 | 568 | 35.608505 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 410 | 422 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 567 | 586 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 569 | 586 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_010669046.2 | receptor-like protein kinase HSL1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9SGP2 | Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LBI7 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology