Basic Information
Locus ID:
gene_13030
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_12_Chr_6 | 31916838 | 31922875 | + | gene_13030 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.84 | 87,204.71 Da | 49.95 | 73.17 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 12 | 162 | 2.70571E-51 | - |
| Pfam | PF00069 | Protein kinase domain | 465 | 717 | 1.3E-38 | IPR000719 |
| Pfam | PF00582 | Universal stress protein family | 12 | 133 | 1.1E-6 | IPR006016 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 446 | 723 | 4.18E-67 | IPR011009 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 12 | 135 | 5.19E-7 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 10 | 160 | 4.8E-9 | IPR014729 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 537 | 742 | 4.8E-47 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 444 | 536 | 4.5E-25 | - |
| SMART | SM00220 | serkin_6 | 464 | 734 | 1.2E-24 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 464 | 734 | 34.195107 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 582 | 594 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 184 | 206 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 309 | 330 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 170 | 268 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 750 | 791 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 753 | 791 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 238 | 261 | - | - |
| Coils | Coil | Coil | 330 | 350 | - | - |
| Coils | Coil | Coil | 376 | 426 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G24370.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_010669606.1 | U-box domain-containing protein 35 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9FKG6 | U-box domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN=PUB52 PE=2 SV=1 | 0 | |
| TrEMBL | A0A834ZL00 | Protein kinase domain-containing protein OS=Tetracentron sinense OX=13715 GN=HHK36_006493 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology