Basic Information
Locus ID:
gene_12648
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr08 | 77305183 | 77348566 | - | gene_12648 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.74 | 113,876.88 Da | 45.46 | 79.17 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 764 | 1010 | 3.142E-129 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 759 | 1009 | 1.8E-67 | IPR001245 |
| Pfam | PF14381 | Ethylene-responsive protein kinase Le-CTR1 | 153 | 356 | 4.3E-75 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 744 | 1008 | 9.71E-83 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 751 | 836 | 3.7E-32 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 837 | 1022 | 3.9E-63 | - |
| SMART | SM00220 | serkin_6 | 758 | 1013 | 4.6E-60 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 758 | 1014 | 43.339802 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 877 | 889 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 764 | 785 | - | IPR017441 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 937 | 959 | 8.5E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 918 | 928 | 8.5E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 832 | 845 | 8.5E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 871 | 889 | 8.5E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 981 | 1003 | 8.5E-12 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 700 | 735 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 90 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 8 | 39 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 546 | 565 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 513 | 534 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 399 | 441 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1015 | 1047 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 422 | 441 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 513 | 541 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1030 | 1047 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 677 | 699 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 51 | 75 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 677 | 741 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G73660.1 | protein tyrosine kinase family protein. Encodes a protein with similarity to MAPKKKs. May function as a negative regulator of salt tolerance. | 0 |
| RefSeq | XP_003634285.1 | PREDICTED: serine/threonine-protein kinase EDR1 isoform X4 [Vitis vinifera] | 0 |
| Q9C9U5 | Probable serine/threonine-protein kinase SIS8 OS=Arabidopsis thaliana OX=3702 GN=SIS8 PE=1 SV=1 | 0 | |
| TrEMBL | F6GSK1 | Protein kinase domain-containing protein OS=Vitis vinifera OX=29760 GN=VIT_17s0000g02540 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg13330, jg27008 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_19984 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah002212 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_5g112590 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg32008, Sbi_jg57337 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg25062 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00022170 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl53992, Sgl59326 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000004445, gene:ENSEOMG00000022430 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.5AG0014000, CQ.Regalona.r1.5BG0014570 |
| Anacardiaceae | Pistacia vera | 2 | pistato.v30150090, pistato.v30292110 |
| Apiaceae | Apium graveolens | 3 | Ag4G00690, Ag4G00691, Ag7G02483 |
| Arecaceae | Cocos nucifera | 2 | scaffold003768G000020, scaffold003768G000030 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103695944 |
| Asteraceae | Flaveria trinervia | 3 | Ftri17G12395, Ftri6G13516, Ftri8G18347 |
| Brassicaceae | Arabidopsis thaliana | 2 | AT1G18160.1, AT1G73660.1 |
| Brassicaceae | Eutrema salsugineum | 2 | Thhalv10006685m.g.v1.0, Thhalv10018059m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 2 | Sp1g16150.v2.2, Sp5g28840.v2.2 |
| Brassicaceae | Brassica nigra | 2 | BniB03g052000.2N, BniB04g032620.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq03G2843 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl03G2996 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate05g04230 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG10.104 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00033264 |
| Plumbaginaceae | Limonium bicolor | 3 | Lb3G16546, Lb3G16558, Lb3G16559 |
| Poaceae | Echinochloa crus-galli | 6 | AH06.924, AH07.3446, BH06.954, BH07.3276, CH06.1049 ... |
| Poaceae | Eleusine coracana subsp. coracana | 4 | gene-QOZ80_2AG0145410, gene-QOZ80_2BG0200850 ... |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.6HG0615510.1, HORVU.MOREX.r3.7HG0666850.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_028939 |
| Poaceae | Oryza coarctata | 4 | Oco03G021390, Oco04G022010, Oco11G006020, Oco12G006050 |
| Poaceae | Oryza sativa | 2 | LOC_Os02g50970.1, LOC_Os06g12590.1 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_04G276100, gene-BS78_10G097900 |
| Poaceae | Puccinellia tenuiflora | 5 | Pt_Chr0203341, Pt_Chr0301178, Pt_Chr0404700, Pt_Chr0404755 ... |
| Poaceae | Sporobolus alterniflorus | 5 | Chr06G002430, Chr09G020370, Chr11G019450, Chr13G004530 ... |
| Poaceae | Thinopyrum elongatum | 2 | Tel6E01G551600, Tel7E01G350500 |
| Poaceae | Triticum dicoccoides | 4 | gene_TRIDC6AG046420, gene_TRIDC6BG054100 ... |
| Poaceae | Triticum aestivum | 6 | TraesCS6A02G308500.1, TraesCS6B02G337200.1 ... |
| Poaceae | Zea mays | 2 | Zm00001eb254410_P001, Zm00001eb372210_P001 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-51386, nbis-gene-8736 |
| Poaceae | Zoysia macrostachya | 3 | Zma_g14410, Zma_g29401, Zma_g31637 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG01.2242, evm.TU.LG14.1415 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc02g31140 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_11_RagTag.722 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-14384 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-4291 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-12341 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000061l.12 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00009016 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-940 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-8399 |
| Salicaceae | Populus euphratica | 2 | populus_peu28272, populus_peu29725 |
| Solanaceae | Lycium barbarum | 2 | gene-LOC132599808, gene-LOC132633248 |
| Solanaceae | Solanum chilense | 2 | SOLCI000422700, SOLCI003030600 |
| Solanaceae | Solanum pennellii | 2 | gene-LOC107014282, gene-LOC107023126 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_12648 |
| Tamaricaceae | Tamarix chinensis | 1 | TC05G1021 |
| Zosteraceae | Zostera marina | 1 | Zosma06g16700.v3.1 |