Basic Information
Locus ID:
gene_12349
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr08 | 12814063 | 12819056 | - | gene_12349 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.44 | 100,946.15 Da | 37.95 | 82.77 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 591 | 863 | 1.19721E-91 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 323 | 360 | 0.0097 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 113 | 149 | 4.1E-7 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 588 | 855 | 1.8E-48 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 382 | 423 | 3.7E-8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 28 | 62 | 3.0E-5 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 562 | 858 | 6.2E-79 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 45 | 431 | 2.72E-50 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 663 | 884 | 1.0E-57 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 548 | 662 | 2.6E-37 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 26 | 321 | 1.3E-73 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 323 | 448 | 1.0E-32 | IPR032675 |
| SMART | SM00220 | serkin_6 | 585 | 864 | 4.2E-41 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 185 | 208 | 55.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 88 | 110 | 390.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 111 | 134 | 3.4E-4 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 386 | 410 | 12.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 585 | 864 | 41.092499 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 710 | 722 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 591 | 613 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 446 | 472 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 910 | 932 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G23750.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_011101591.1 | receptor-like kinase TMK4 [Sesamum indicum] | 0 |
| Q9LK43 | Receptor-like kinase TMK4 OS=Arabidopsis thaliana OX=3702 GN=TMK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6A1VLR2 | Putative receptor protein kinase TMK1 OS=Morella rubra OX=262757 GN=CJ030_MR5G023026 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology