Basic Information
Locus ID:
gene_12191
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
Ordered Locus Names sll0103
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_12_Chr_6 | 1968217 | 1973718 | + | gene_12191 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.29 | 57,901.57 Da | 30.50 | 89.62 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00092 | von Willebrand factor type A domain | 64 | 218 | 5.1E-23 | IPR002035 |
| SUPERFAMILY | SSF53300 | vWA-like | 60 | 222 | 3.93E-28 | IPR036465 |
| Gene3D | G3DSA:3.40.50.410 | von Willebrand factor, type A domain | 64 | 237 | 4.9E-36 | IPR036465 |
| SMART | SM00327 | VWA_4 | 62 | 235 | 2.2E-20 | IPR002035 |
| ProSiteProfiles | PS50234 | VWFA domain profile. | 64 | 237 | 18.600243 | IPR002035 |
| Coils | Coil | Coil | 74 | 94 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G08050.1 | Zinc finger (C3HC4-type RING finger) family protein. | 0 |
| RefSeq | XP_028110410.1 | E3 ubiquitin-protein ligase WAV3-like [Camellia sinensis] | 0 |
| TrEMBL | A0A2P5D053 | von Willebrand factor, type A OS=Parasponia andersonii OX=3476 GN=PanWU01x14_108790 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology