Basic Information
Locus ID:
gene_12183
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
Ordered Locus Names sll0103
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_12_Chr_6 | 1807009 | 1809859 | + | gene_12183 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.41 | 61,258.19 Da | 43.48 | 93.94 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00092 | von Willebrand factor type A domain | 65 | 223 | 8.4E-22 | IPR002035 |
| Pfam | PF14624 | VWA / Hh protein intein-like | 413 | 477 | 4.3E-11 | IPR032838 |
| SUPERFAMILY | SSF53300 | vWA-like | 61 | 228 | 1.57E-28 | IPR036465 |
| Gene3D | G3DSA:3.40.50.410 | von Willebrand factor, type A domain | 65 | 239 | 3.4E-36 | IPR036465 |
| SMART | SM00327 | VWA_4 | 63 | 240 | 3.4E-22 | IPR002035 |
| ProSiteProfiles | PS50234 | VWFA domain profile. | 65 | 241 | 19.868198 | IPR002035 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_002524155.1 | E3 ubiquitin-protein ligase WAV3 [Ricinus communis] | 0 |
| TrEMBL | B9SDT6 | Inter-alpha-trypsin inhibitor heavy chain H3, putative OS=Ricinus communis OX=3988 GN=RCOM_1711500 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology