Basic Information
Locus ID:
gene_12167
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
Sodium hydrogen exchanger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_12_Chr_6 | 1483552 | 1488831 | + | gene_12167 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.02 | 58,481.47 Da | 37.08 | 108.99 | 0.59 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00999 | Sodium/hydrogen exchanger family | 30 | 447 | 1.3E-60 | IPR006153 |
| Gene3D | G3DSA:1.20.1530.20 | - | 24 | 452 | 2.1E-14 | IPR038770 |
| TIGRFAM | TIGR00840 | b_cpa1: sodium/hydrogen exchanger 3 | 28 | 482 | 4.4E-76 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 86 | 97 | 1.2E-10 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 155 | 165 | 1.2E-10 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 100 | 114 | 1.2E-10 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 115 | 123 | 1.2E-10 | IPR004709 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G55470.1 | Na+/H+ (sodium hydrogen) exchanger 3. member of Sodium proton exchanger family | 0 |
| RefSeq | XP_010675850.1 | sodium/hydrogen exchanger 4 isoform X1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q8S397 | Sodium/hydrogen exchanger 4 OS=Arabidopsis thaliana OX=3702 GN=NHX4 PE=2 SV=2 | 0 | |
| TrEMBL | A0A7N2M8P0 | Sodium/hydrogen exchanger OS=Quercus lobata OX=97700 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology