Basic Information
Locus ID:
gene_12162
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_12_Chr_6 | 1330405 | 1332317 | + | gene_12162 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.92 | 48,389.82 Da | 51.06 | 84.11 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 27 | 291 | 8.16964E-113 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 29 | 291 | 2.6E-62 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 10 | 291 | 4.32E-77 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 13 | 117 | 4.9E-18 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 118 | 331 | 6.4E-63 | - |
| SMART | SM00220 | serkin_6 | 25 | 294 | 4.3E-65 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 25 | 295 | 44.512924 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 159 | 171 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 153 | 171 | 1.7E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 262 | 284 | 1.7E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 113 | 126 | 1.7E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 199 | 209 | 1.7E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 218 | 240 | 1.7E-16 | IPR001245 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G58950.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_021597169.1 | serine/threonine/tyrosine-protein kinase HT1 [Manihot esculenta] | 0 |
| Q2MHE4 | Serine/threonine/tyrosine-protein kinase HT1 OS=Arabidopsis thaliana OX=3702 GN=HT1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2C9U8E6 | Protein kinase domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_16G028700 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology