Basic Information
Locus ID:
gene_12124
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Short Name:
CBL3
Description:
calcineurin b-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_12_Chr_6 | 639371 | 646338 | + | gene_12124 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.64 | 28,205.05 Da | 42.97 | 93.84 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13202 | EF hand | 104 | 125 | 0.045 | IPR002048 |
| Pfam | PF13202 | EF hand | 186 | 208 | 2.2E-5 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 49 | 233 | 3.15E-44 | IPR011992 |
| Gene3D | G3DSA:1.10.238.10 | - | 48 | 242 | 1.4E-66 | - |
| SMART | SM00054 | efh_1 | 139 | 167 | 27.0 | IPR002048 |
| SMART | SM00054 | efh_1 | 102 | 130 | 1.5 | IPR002048 |
| SMART | SM00054 | efh_1 | 183 | 211 | 4.3 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 135 | 170 | 9.910664 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 98 | 133 | 11.444912 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 179 | 214 | 10.719631 | IPR002048 |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
ko04010 (MAPK signaling pathway)
map04010 (MAPK signaling pathway)
ko04020 (Calcium signaling pathway)
map04020 (Calcium signaling pathway)
ko04022 (cGMP-PKG signaling pathway)
map04022 (cGMP-PKG signaling pathway)
ko04114 (Oocyte meiosis)
map04114 (Oocyte meiosis)
ko04218 (Cellular senescence)
map04218 (Cellular senescence)
ko04310 (Wnt signaling pathway)
map04310 (Wnt signaling pathway)
ko04370 (VEGF signaling pathway)
map04370 (VEGF signaling pathway)
map04650 (Natural killer cell mediated cytotoxicity)
map04658 (Th1 and Th2 cell differentiation)
map04659 (Th17 cell differentiation)
map04660 (T cell receptor signaling pathway)
map04662 (B cell receptor signaling pathway)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G26570.1 | calcineurin B-like 3. member of AtCBLs (Calcineurin B-like Calcium Sensor Proteins) | 0 |
| RefSeq | XP_021740741.1 | calcineurin B-like protein 2 [Chenopodium quinoa] | 0 |
| Q75LU8 | Calcineurin B-like protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=CBL3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7C9DAA6 | Calcineurin B-like protein OS=Opuntia streptacantha OX=393608 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology