Basic Information
Locus ID:
gene_12123
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
Small ubiquitin-related modifier
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr08 | 126166244 | 126169565 | + | gene_12123 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.93 | 12,463.39 Da | 43.80 | 94.82 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16116 | Ubl_Smt3_like | 17 | 77 | 2.00493E-39 | - |
| Pfam | PF11976 | Ubiquitin-2 like Rad60 SUMO-like | 18 | 76 | 1.2E-17 | IPR022617 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 6 | 77 | 3.85E-18 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 17 | 77 | 2.3E-27 | - |
| SMART | SM00213 | ubq_7 | 18 | 89 | 2.3E-6 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 16 | 77 | 11.289755 | IPR000626 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G26840.1 | small ubiquitin-like modifier 1. Encodes a small ubiquitin-like modifier (SUMO) polypeptide that becomes covalently attached to various intracellular protein targets, much like ubiquitination, leading to post-translational modification of those targets. | 0 |
| RefSeq | XP_006401487.1 | small ubiquitin-related modifier 1 [Eutrema salsugineum] | 0 |
| P55852 | Small ubiquitin-related modifier 1 OS=Arabidopsis thaliana OX=3702 GN=SUMO1 PE=1 SV=2 | 0 | |
| TrEMBL | V4KY52 | Small ubiquitin-related modifier OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10015094mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology