Basic Information
Locus ID:
gene_12023
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
Sodium hydrogen exchanger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_8_Chr_3 | 42672487 | 42681651 | + | gene_12023 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.27 | 60,887.54 Da | 39.49 | 114.70 | 0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00999 | Sodium/hydrogen exchanger family | 34 | 444 | 7.9E-60 | IPR006153 |
| Gene3D | G3DSA:6.10.140.1330 | - | 149 | 201 | 7.9E-16 | - |
| TIGRFAM | TIGR00840 | b_cpa1: sodium/hydrogen exchanger 3 | 28 | 449 | 1.8E-78 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 117 | 125 | 2.9E-12 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 157 | 167 | 2.9E-12 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 88 | 99 | 2.9E-12 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 102 | 116 | 2.9E-12 | IPR004709 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G27150.1 | Na+/H+ exchanger 1. Encodes a vacuolar sodium/proton antiporter involved in salt tolerance, ion homeostasis, and leaf development. | 0 |
| RefSeq | XP_010675005.2 | sodium/hydrogen exchanger 1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q68KI4 | Sodium/hydrogen exchanger 1 OS=Arabidopsis thaliana OX=3702 GN=NHX1 PE=1 SV=2 | 0 | |
| TrEMBL | A8YPK5 | Sodium/hydrogen exchanger OS=Mesembryanthemum crystallinum OX=3544 GN=nhx3 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology