halophFGD

Basic Information

Locus ID: gene_11975

Species & Taxonomic ID: Mesembryanthemum crystallinum & 3544

Genome Assembly: Koichi Toyokura Assembly

Description: epoxide hydrolase

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
Super-Scaffold_8_Chr_3	41693692	41695465	+	gene_11975

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.76	36,398.29 Da	38.47	80.72	-0.24

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF00561	alpha/beta hydrolase fold	29	130	8.6E-24	IPR000073
SUPERFAMILY	SSF53474	alpha/beta-Hydrolases	2	320	9.92E-70	IPR029058
Gene3D	G3DSA:3.40.50.1820	alpha/beta hydrolase	1	321	2.1E-108	IPR029058
PRINTS	PR00111	Alpha/beta hydrolase fold signature	55	70	4.7E-6	IPR000073
PRINTS	PR00111	Alpha/beta hydrolase fold signature	115	128	4.7E-6	IPR000073
PRINTS	PR00111	Alpha/beta hydrolase fold signature	101	114	4.7E-6	IPR000073
PRINTS	PR00412	Epoxide hydrolase signature	55	70	3.4E-40	IPR000639
PRINTS	PR00412	Epoxide hydrolase signature	101	114	3.4E-40	IPR000639
PRINTS	PR00412	Epoxide hydrolase signature	35	53	3.4E-40	IPR000639
PRINTS	PR00412	Epoxide hydrolase signature	115	128	3.4E-40	IPR000639
PRINTS	PR00412	Epoxide hydrolase signature	255	271	3.4E-40	IPR000639
PRINTS	PR00412	Epoxide hydrolase signature	295	317	3.4E-40	IPR000639

Gene Ontology

Molecular Function:

GO:0003824 (catalytic activity)

KEGG Pathway

KO Term:

K08726 (soluble epoxide hydrolase / lipid-phosphate phosphatase [EC:3.3.2.10 3.1.3.76])

Pathway:

ko00590 (Arachidonic acid metabolism) map00590 (Arachidonic acid metabolism) ko00625 (Chloroalkane and chloroalkene degradation) map00625 (Chloroalkane and chloroalkene degradation) ko01100 (Metabolic pathways) map01100 (Metabolic pathways) ko01120 (Microbial metabolism in diverse environments) map01120 (Microbial metabolism in diverse environments) ko04146 (Peroxisome) map04146 (Peroxisome)

Reaction:

R05842 (Ethylene oxide + H2O <=> Ethylene glycol) R07108 (14,15-EET + H2O <=> 14,15-DHET) R07109 (11,12-EET + H2O <=> 11,12-DHET) R07110 (8,9-EET + H2O <=> 8,9-DHET) R07111 (5,6-EET + H2O <=> 5,6-DHET)

Best hit

Source	Best Hit ID	Description
TAIR	AT4G02340.1	alpha/beta-Hydrolases superfamily protein.
RefSeq	XP_021836168.1	uncharacterized protein LOC110775877 [Spinacia oleracea]
Swiss-Prot	P0DO68	Epoxide hydrolase 1 OS=Siraitia grosvenorii OX=190515 GN=EPH1 PE=1 SV=1
TrEMBL	A0A0K9RLR6	AB hydrolase-1 domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_052190 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	6	jg12401, jg1419, jg28059, jg28060, jg35162, jg35163
Aizoaceae	Mesembryanthemum crystallinum	6	gene_11975, gene_16798, gene_4361, gene_4363, gene_4468 ... gene_5238
Amaranthaceae	Atriplex hortensis	6	Ah005714, Ah021213, Ah021267, Ah027655, Ah029413, Ah032829
Amaranthaceae	Beta vulgaris	3	BVRB_4g076010, BVRB_6g129510, BVRB_7g163570
Amaranthaceae	Salicornia bigelovii	12	Sbi_jg1284, Sbi_jg14166, Sbi_jg17179, Sbi_jg35286 ... Sbi_jg35287, Sbi_jg46571, Sbi_jg53436, Sbi_jg59954, Sbi_jg59955, Sbi_jg61788, Sbi_jg62898, Sbi_jg62901
Amaranthaceae	Salicornia europaea	5	Seu_jg10073, Seu_jg23964, Seu_jg23965, Seu_jg3431, Seu_jg440
Amaranthaceae	Suaeda aralocaspica	4	GOSA_00015371, GOSA_00025381, GOSA_00025775, GOSA_00026797
Amaranthaceae	Suaeda glauca	16	Sgl03299, Sgl03302, Sgl03306, Sgl03582, Sgl03591, Sgl08371 ... Sgl08374, Sgl08378, Sgl08709, Sgl08715, Sgl24445, Sgl29620, Sgl34786, Sgl40185, Sgl74089, Sgl77569
Amaranthaceae	Chenopodium album	16	gene:ENSEOMG00000007107, gene:ENSEOMG00000009412 ... gene:ENSEOMG00000012851, gene:ENSEOMG00000012906, gene:ENSEOMG00000027694, gene:ENSEOMG00000029580, gene:ENSEOMG00000030650, gene:ENSEOMG00000031419, gene:ENSEOMG00000031973, gene:ENSEOMG00000034497, gene:ENSEOMG00000040140, gene:ENSEOMG00000040178, gene:ENSEOMG00000041938, gene:ENSEOMG00000044695, gene:ENSEOMG00000045044, gene:ENSEOMG00000045409
Amaranthaceae	Chenopodium quinoa	10	CQ.Regalona.r1.3AG0016850, CQ.Regalona.r1.3AG0016860 ... CQ.Regalona.r1.3AG0016890, CQ.Regalona.r1.3BG0021060, CQ.Regalona.r1.3BG0021070, CQ.Regalona.r1.4AG0007850, CQ.Regalona.r1.4BG0007990, CQ.Regalona.r1.6AG0027290, CQ.Regalona.r1.7AG0012840, CQ.Regalona.r1.7BG0014810
Anacardiaceae	Pistacia vera	5	pistato.v30008870, pistato.v30073480, pistato.v30115270 ... pistato.v30208260, pistato.v30209440
Apiaceae	Apium graveolens	11	Ag10G01810, Ag1G00530, Ag1G01981, Ag1G01982, Ag1G01983 ... Ag2G02518, Ag5G02406, Ag5G02407, Ag8G00663, Ag8G00750, Ag9G01882
Arecaceae	Cocos nucifera	6	COCNU_01G001620, COCNU_16G003650, COCNU_16G003660 ... contig69388055G000010, scaffold010452G000010, scaffold055797G000010
Arecaceae	Phoenix dactylifera	10	gene-LOC103696229, gene-LOC103703630, gene-LOC103703631 ... gene-LOC103707223, gene-LOC103719777, gene-LOC120103647, gene-LOC120105568, gene-LOC120105569, gene-LOC120105570, gene-LOC120107309
Asparagaceae	Asparagus officinalis	6	AsparagusV1_02.2141.V1.1, AsparagusV1_03.2006.V1.1 ... AsparagusV1_07.1409.V1.1, AsparagusV1_07.1483.V1.1, AsparagusV1_07.1484.V1.1, AsparagusV1_10.1036.V1.1
Asteraceae	Flaveria trinervia	17	Ftri12G02672, Ftri12G14572, Ftri13G03528, Ftri13G13903 ... Ftri13G15221, Ftri13G15510, Ftri13G22795, Ftri13G26634, Ftri17G17275, Ftri3G00458, Ftri3G03869, Ftri3G06014, Ftri3G20968, Ftri3G21208, Ftri3G28304, Ftri7G20699, Ftri9G13246
Brassicaceae	Arabidopsis thaliana	7	AT2G26740.1, AT2G26750.1, AT3G05600.1, AT3G51000.1 ... AT4G02340.1, AT4G15955.3, AT4G15960.1
Brassicaceae	Eutrema salsugineum	8	Thhalv10010546m.g.v1.0, Thhalv10021209m.g.v1.0 ... Thhalv10022504m.g.v1.0, Thhalv10025488m.g.v1.0, Thhalv10025505m.g.v1.0, Thhalv10025689m.g.v1.0, Thhalv10025778m.g.v1.0, Thhalv10028814m.g.v1.0
Brassicaceae	Schrenkiella parvula	6	Sp3g04480.v2.2, Sp4g08750.v2.2, Sp5g11210.v2.2 ... Sp6g02220.v2.2, Sp7g14410.v2.2, Sp7g14430.v2.2
Brassicaceae	Brassica nigra	10	BniB01g016990.2N, BniB01g017010.2N, BniB01g058000.2N ... BniB02g073560.2N, BniB02g073600.2N, BniB02g074910.2N, BniB03g028800.2N, BniB05g022030.2N, BniB08g044920.2N, BniB08g064990.2N
Casuarinaceae	Casuarina equisetifolia	10	Ceq02G2591, Ceq06G0257, Ceq06G0258, Ceq06G0983, Ceq06G0984 ... Ceq06G0985, Ceq06G0986, Ceq06G0987, Ceq06G0988, Ceq09G1113
Casuarinaceae	Casuarina glauca	9	Cgl06G0283, Cgl06G0284, Cgl06G1013, Cgl06G1014, Cgl06G1015 ... Cgl06G1016, Cgl06G1017, Cgl06G1020, Cgl09G1209
Cymodoceaceae	Cymodocea nodosa	3	gene.Cymno01g05870, gene.Cymno13g04510, gene.Cymno18g01170
Dunaliellaceae	Dunaliella salina	2	Dusal.0186s00003.v1.0, Dusal.0218s00003.v1.0
Hydrocharitaceae	Thalassia testudinum	5	gene.Thate01g03130, gene.Thate01g03140, gene.Thate01g30930 ... gene.Thate02g28630, gene.Thate02g28640
Malvaceae	Hibiscus hamabo Siebold & Zucc.	7	nbisL1-mrna-1635, nbisL1-mrna-1638, nbisL1-mrna-1642 ... nbisL1-mrna-4522, nbisL1-mrna-6249, nbisL1-mrna-8245, nbisL1-mrna-9616
Nitrariaceae	Nitraria sibirica	6	evm.TU.LG04.374, evm.TU.LG04.375, evm.TU.LG11.1276 ... evm.TU.LG11.1277, evm.TU.LG11.1278, evm.TU.LG12.460
Plantaginaceae	Plantago ovata	12	Pov_00007225, Pov_00014325, Pov_00022613, Pov_00022633 ... Pov_00022635, Pov_00022636, Pov_00022637, Pov_00030562, Pov_00030759, Pov_00031965, Pov_00036801, Pov_00036802
Plumbaginaceae	Limonium bicolor	12	Lb0G37922, Lb1G06651, Lb4G21895, Lb4G21896, Lb4G21897 ... Lb4G21898, Lb4G21902, Lb4G23267, Lb4G24500, Lb5G28141, Lb6G30180, Lb6G30181
Poaceae	Echinochloa crus-galli	19	AH01.477, AH01.479, AH05.3156, AH05.4214, AH05.4215, CH01.97 ... BH01.259, BH01.262, BH05.3208, BH05.4302, BH05.4303, BH05.4304, CH01.99, CH02.1256, CH02.714, CH05.3257, CH05.3456, CH05.4535, CH06.772
Poaceae	Eleusine coracana subsp. coracana	15	gene-QOZ80_1AG0005240, gene-QOZ80_1BG0053890 ... gene-QOZ80_3AG0209420, gene-QOZ80_3AG0209600, gene-QOZ80_3BG0254560, gene-QOZ80_3BG0254700, gene-QOZ80_5AG0399580, gene-QOZ80_5AG0399590, gene-QOZ80_5AG0400320, gene-QOZ80_5BG0448270, gene-QOZ80_5BG0448280, gene-QOZ80_5BG0448290, gene-QOZ80_5BG0448950, gene-QOZ80_7AG0561870, gene-QOZ80_7BG0593350
Poaceae	Hordeum vulgare	8	HORVU.MOREX.r3.3HG0253620.1, HORVU.MOREX.r3.5HG0431980.1 ... HORVU.MOREX.r3.5HG0528520.1, HORVU.MOREX.r3.5HG0528540.1, HORVU.MOREX.r3.6HG0543200.1, HORVU.MOREX.r3.7HG0674690.1, HORVU.MOREX.r3.7HG0674720.1, HORVU.MOREX.r3.7HG0676100.1
Poaceae	Lolium multiflorum	10	gene-QYE76_004631, gene-QYE76_004632, gene-QYE76_004633 ... gene-QYE76_004637, gene-QYE76_052144, gene-QYE76_052148, gene-QYE76_060486, gene-QYE76_060489, gene-QYE76_065643, gene-QYE76_069417
Poaceae	Oryza coarctata	10	Oco01G006880, Oco02G007210, Oco05G027960, Oco06G028930 ... Oco06G028940, Oco10G005540, Oco19G007110, Oco20G007090, Oco23G011280, Oco24G011080
Poaceae	Oryza sativa	6	LOC_Os01g15120.1, LOC_Os01g15130.1, LOC_Os03g61340.1 ... LOC_Os03g61360.1, LOC_Os05g19150.1, LOC_Os12g43970.1
Poaceae	Paspalum vaginatum	8	gene-BS78_01G020000, gene-BS78_01G021800, gene-BS78_K269300 ... gene-BS78_02G111900, gene-BS78_02G359600, gene-BS78_03G105600, gene-BS78_08G168800, gene-BS78_08G168900
Poaceae	Puccinellia tenuiflora	18	Pt_Chr0100301, Pt_Chr0100327, Pt_Chr0103447, Pt_Chr0105975 ... Pt_Chr0105976, Pt_Chr0105977, Pt_Chr0108194, Pt_Chr0108196, Pt_Chr0108197, Pt_Chr0200414, Pt_Chr0204719, Pt_Chr0204721, Pt_Chr0207208, Pt_Chr0207417, Pt_Chr0604048, Pt_Chr0605321, Pt_Chr0702546, Pt_Chr0702567
Poaceae	Sporobolus alterniflorus	16	Chr02G026160, Chr03G001990, Chr04G020010, Chr04G032000 ... Chr04G032060, Chr04G032080, Chr05G003910, Chr06G020960, Chr07G030990, Chr07G031120, Chr08G003120, Chr12G026230, Chr19G007000, Chr23G019570, Chr23G019580, Chr27G009910
Poaceae	Thinopyrum elongatum	13	Tel1E01G036200, Tel1E01G099200, Tel3E01G135700 ... Tel3E01G305700, Tel3E01G429100, Tel3E01G909200, Tel5E01G119100, Tel5E01G782500, Tel5E01G782700, Tel6E01G082700, Tel7E01G404000, Tel7E01G404200, Tel7E01G411600
Poaceae	Triticum dicoccoides	22	gene_TRIDC1AG001740, gene_TRIDC1BG007840 ... gene_TRIDC3AG024320, gene_TRIDC3AG038250, gene_TRIDC3AG076000, gene_TRIDC3AG076210, gene_TRIDC3BG007220, gene_TRIDC3BG012100, gene_TRIDC3BG079560, gene_TRIDC4AG054570, gene_TRIDC4AG054610, gene_TRIDC5AG008170, gene_TRIDC5BG010290, gene_TRIDC6AG003640, gene_TRIDC6BG005250, gene_TRIDC7AG028310, gene_TRIDC7AG028820, gene_TRIDC7BG019110, gene_TRIDC7BG019120, gene_TRIDC7BG019150, gene_TRIDC7BG019310, gene_TRIDC7BG020180
Poaceae	Triticum aestivum	36	TraesCS1B02G061000.1.cds1, TraesCS1D02G048000.1 ... TraesCS3A02G175200.2, TraesCS3A02G255200.1, TraesCS3A02G536800.1, TraesCS3A02G538800.2, TraesCS3B02G055400.1, TraesCS3B02G088600.1, TraesCS3B02G204900.1, TraesCS3B02G606900.1, TraesCS3D02G074100.1, TraesCS3D02G180600.1, TraesCS3D02G545700.1, TraesCS4A02G366000.1, TraesCS4A02G366100.1, TraesCS5A02G053600.1, TraesCS5B02G507200.1, TraesCS5B02G507300.1, TraesCS5D02G065000.1, TraesCS5D02G507000.1, TraesCS5D02G507100.1, TraesCS5D02G507300.1, TraesCS6A02G029300.1, TraesCS7A02G222400.1, TraesCS7A02G222600.1, TraesCS7A02G225600.1, TraesCS7B02G128800.1, TraesCS7B02G128900.1, TraesCS7B02G129100.1, TraesCS7B02G194000.1, TraesCS7D02G224000.1, TraesCS7D02G224200.1, TraesCS7D02G228900.1, TraesCSU02G047100.1, TraesCSU02G168300.1, TraesCSU02G202200.2
Poaceae	Zea mays	8	Zm00001eb032970_P001, Zm00001eb032990_P001 ... Zm00001eb063510_P001, Zm00001eb127750_P001, Zm00001eb134120_P001, Zm00001eb211290_P001, Zm00001eb211300_P001, Zm00001eb408720_P001
Poaceae	Zoysia japonica	8	nbis-gene-15575, nbis-gene-16681, nbis-gene-16683 ... nbis-gene-17853, nbis-gene-47415, nbis-gene-47416, nbis-gene-59239, nbis-gene-7285
Poaceae	Zoysia macrostachya	5	Zma_g113, Zma_g2427, Zma_g26203, Zma_g27932, Zma_g9740
Portulacaceae	Portulaca oleracea	20	evm.TU.LG02.328, evm.TU.LG02.329, evm.TU.LG03.517 ... evm.TU.LG03.631, evm.TU.LG03.858, evm.TU.LG03.859, evm.TU.LG03.860, evm.TU.LG03.861, evm.TU.LG03.864, evm.TU.LG03.865, evm.TU.LG08.701, evm.TU.LG09.1593, evm.TU.LG12.1099, evm.TU.LG12.1205, evm.TU.LG12.872, evm.TU.LG12.873, evm.TU.LG12.877, evm.TU.LG12.878, evm.TU.LG12.879, evm.TU.LG22.1311
Posidoniaceae	Posidonia oceanica	3	gene.Posoc02g07920, gene.Posoc07g11750, gene.Posoc07g11860
Rhizophoraceae	Bruguiera sexangula	4	evm.TU.Scaffold_1_RagTag.2242, evm.TU.Scaffold_1_RagTag.98 ... evm.TU.Scaffold_3_RagTag.604, evm.TU.Scaffold_9_RagTag.806
Rhizophoraceae	Carallia pectinifolia	7	nbisL1-mrna-1364, nbisL1-mrna-21420, nbisL1-mrna-21421 ... nbisL1-mrna-21422, nbisL1-mrna-28225, nbisL1-mrna-28229, nbisL1-mrna-8177
Rhizophoraceae	Ceriops tagal	4	nbisL1-mrna-19970, nbisL1-mrna-4673, nbisL1-mrna-5152 ... nbisL1-mrna-8155
Rhizophoraceae	Ceriops zippeliana	4	nbisL1-mrna-18493, nbisL1-mrna-3307, nbisL1-mrna-5184 ... nbisL1-mrna-6306
Rhizophoraceae	Kandelia candel	4	add.evm.TU.utg000016l.36, evm.TU.utg000003l.595 ... evm.TU.utg000012l.71, evm.TU.utg000019l.851
Rhizophoraceae	Kandelia obovata	4	Maker00009878, Maker00011371, Maker00012678, Maker00016462
Rhizophoraceae	Rhizophora apiculata	5	nbisL1-mrna-12188, nbisL1-mrna-12189, nbisL1-mrna-1574 ... nbisL1-mrna-4680, nbisL1-mrna-7889
Rhizophoraceae	Rhizophora mangle	5	nbisL1-mrna-14162, nbisL1-mrna-18199, nbisL1-mrna-18200 ... nbisL1-mrna-5242, nbisL1-mrna-89
Salicaceae	Populus euphratica	12	populus_peu13339, populus_peu13826, populus_peu15666 ... populus_peu22248, populus_peu22249, populus_peu23637, populus_peu27283, populus_peu31255, populus_peu31256, populus_peu31269, populus_peu31270, populus_peu36524
Solanaceae	Lycium barbarum	8	gene-LOC132604517, gene-LOC132605582, gene-LOC132608858 ... gene-LOC132608860, gene-LOC132626769, gene-LOC132640215, gene-LOC132640216, gene-LOC132645987
Solanaceae	Solanum chilense	4	SOLCI000342300, SOLCI002774600, SOLCI004699800 ... SOLCI006473800
Solanaceae	Solanum pennellii	9	gene-LOC107010644, gene-LOC107010650, gene-LOC107011890 ... gene-LOC107019069, gene-LOC107020468, gene-LOC107020469, gene-LOC107021179, gene-LOC107031465, gene-LOC114075189
Tamaricaceae	Reaumuria soongarica	5	gene_18139, gene_6232, gene_7839, gene_8527, gene_8528
Tamaricaceae	Tamarix chinensis	4	TC01G0392, TC02G0845, TC12G1665, TC12G1666
Zosteraceae	Zostera marina	6	Zosma01g29630.v3.1, Zosma04g00260.v3.1, Zosma04g00270.v3.1 ... Zosma06g08450.v3.1, Zosma06g21620.v3.1, Zosma06g21970.v3.1