Basic Information
Locus ID:
gene_11928
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Short Name:
CPK24
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr08 | 110817671 | 110821091 | + | gene_11928 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.20 | 63,350.74 Da | 39.44 | 81.92 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 64 | 322 | 3.10975E-140 | - |
| Pfam | PF13499 | EF-hand domain pair | 441 | 505 | 8.9E-11 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 65 | 323 | 1.0E-77 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 369 | 430 | 4.5E-9 | IPR002048 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 62 | 333 | 7.15E-89 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 362 | 506 | 1.82E-39 | IPR011992 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 151 | 332 | 1.2E-59 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 333 | 510 | 3.3E-48 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 67 | 150 | 7.6E-31 | - |
| SMART | SM00220 | serkin_6 | 65 | 323 | 3.2E-102 | IPR000719 |
| SMART | SM00054 | efh_1 | 442 | 470 | 1.1E-4 | IPR002048 |
| SMART | SM00054 | efh_1 | 370 | 398 | 8.6E-6 | IPR002048 |
| SMART | SM00054 | efh_1 | 480 | 508 | 0.0011 | IPR002048 |
| SMART | SM00054 | efh_1 | 406 | 434 | 0.092 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 438 | 473 | 13.258112 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 366 | 401 | 15.88028 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 402 | 437 | 9.492233 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 476 | 511 | 11.835447 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 65 | 323 | 50.18066 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 185 | 197 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 451 | 463 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 489 | 501 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 415 | 427 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 379 | 391 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 71 | 94 | - | IPR017441 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G31500.1 | calcium-dependent protein kinase 24. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_010671825.1 | calcium-dependent protein kinase 24 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9SIQ7 | Calcium-dependent protein kinase 24 OS=Arabidopsis thaliana OX=3702 GN=CPK24 PE=2 SV=1 | 0 | |
| TrEMBL | B9HH70 | Calcium-dependent protein kinase 24-like OS=Populus trichocarpa OX=3694 GN=POPTR_007G127000 PE=4 SV=2 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology