Basic Information
Locus ID:
gene_1143
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_2_Chr_2 | 34663281 | 34674514 | - | gene_1143 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.81 | 103,997.09 Da | 50.62 | 78.86 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 678 | 926 | 1.46477E-129 | - |
| Pfam | PF14381 | Ethylene-responsive protein kinase Le-CTR1 | 257 | 465 | 1.9E-72 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 672 | 926 | 3.9E-67 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 647 | 925 | 4.18E-82 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 751 | 937 | 5.0E-61 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 665 | 749 | 4.8E-36 | - |
| SMART | SM00220 | serkin_6 | 672 | 930 | 2.2E-54 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 672 | 930 | 43.763824 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 793 | 805 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 678 | 699 | - | IPR017441 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 746 | 759 | 1.4E-11 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 787 | 805 | 1.4E-11 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 853 | 875 | 1.4E-11 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 897 | 919 | 1.4E-11 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 59 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 22 | 42 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G24480.2 | - | 0 |
| RefSeq | XP_010671624.1 | serine/threonine-protein kinase CTR1 isoform X1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q05609 | Serine/threonine-protein kinase CTR1 OS=Arabidopsis thaliana OX=3702 GN=CTR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9R6Z1 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_099660 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology