Basic Information
Locus ID:
gene_1138
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
Hippocampus abundant transcript 1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 105536883 | 105556193 | + | gene_1138 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.45 | 50,447.87 Da | 37.84 | 106.19 | 0.66 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17330 | MFS_SLC46_TetA_like | 17 | 406 | 6.64294E-54 | - |
| Pfam | PF07690 | Major Facilitator Superfamily | 17 | 387 | 1.6E-26 | IPR011701 |
| SUPERFAMILY | SSF103473 | MFS general substrate transporter | 14 | 420 | 1.96E-35 | IPR036259 |
| Gene3D | G3DSA:1.20.1250.20 | MFS general substrate transporter like domains | 10 | 422 | 6.1E-39 | IPR036259 |
| ProSiteProfiles | PS50850 | Major facilitator superfamily (MFS) profile. | 13 | 425 | 10.462962 | IPR020846 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G42210.1 | Major facilitator superfamily protein. | 0 |
| RefSeq | XP_028056471.1 | hippocampus abundant transcript 1 protein-like isoform X1 [Camellia sinensis] | 0 |
| Q96MC6 | Hippocampus abundant transcript 1 protein OS=Homo sapiens OX=9606 GN=MFSD14A PE=1 SV=2 | 0 | |
| TrEMBL | A0A5B7ALY3 | Putative hippocampus abundant transcript-like protein 1 OS=Davidia involucrata OX=16924 GN=Din_027140 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology