Basic Information
Locus ID:
gene_11246
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr07 | 105203522 | 105216958 | - | gene_11246 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.95 | 102,326.26 Da | 36.94 | 89.24 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 587 | 860 | 3.76012E-93 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 344 | 377 | 0.41 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 584 | 857 | 3.7E-47 | IPR001245 |
| Pfam | PF00560 | Leucine Rich Repeat | 199 | 218 | 1.3 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 35 | 70 | 1.2E-5 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 564 | 857 | 1.6E-77 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 342 | 446 | 8.42E-18 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 44 | 321 | 6.46E-45 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 340 | 464 | 1.9E-30 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 543 | 658 | 1.3E-33 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 33 | 337 | 1.5E-78 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 659 | 881 | 3.7E-57 | - |
| SMART | SM00369 | LRR_typ_2 | 402 | 426 | 72.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 294 | 317 | 12.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 194 | 217 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 119 | 142 | 0.01 | IPR003591 |
| SMART | SM00220 | serkin_6 | 581 | 861 | 4.1E-43 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 581 | 861 | 40.569538 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 121 | 142 | 7.126702 | IPR001611 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 587 | 609 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 706 | 718 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 899 | 936 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G01820.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021847754.1 | receptor protein kinase TMK1-like [Spinacia oleracea] | 0 |
| Q9SIT1 | Receptor-like kinase TMK3 OS=Arabidopsis thaliana OX=3702 GN=TMK3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7C9FAG2 | Receptor protein serine/threonine kinase OS=Opuntia streptacantha OX=393608 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology