Basic Information
Locus ID:
gene_11228
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
Belongs to the ubiquitin-conjugating enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr07 | 104419468 | 104427151 | - | gene_11228 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.37 | 21,916.23 Da | 44.61 | 74.06 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00195 | UBCc | 23 | 150 | 7.09479E-50 | IPR000608 |
| Pfam | PF00179 | Ubiquitin-conjugating enzyme | 26 | 149 | 1.3E-39 | IPR000608 |
| SUPERFAMILY | SSF54495 | UBC-like | 17 | 157 | 6.31E-47 | IPR016135 |
| Gene3D | G3DSA:3.10.110.10 | Ubiquitin Conjugating Enzyme | 16 | 169 | 2.7E-48 | IPR016135 |
| SMART | SM00212 | ubc_7 | 14 | 155 | 5.0E-47 | - |
| ProSiteProfiles | PS50127 | Ubiquitin-conjugating (UBC) core domain profile. | 8 | 155 | 41.131229 | IPR000608 |
| ProSitePatterns | PS00183 | Ubiquitin-conjugating (UBC) active site signature. | 80 | 96 | - | IPR023313 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 164 | 178 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 158 | 192 | - | - |
| Coils | Coil | Coil | 139 | 159 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G41340.1 | ubiquitin conjugating enzyme 4. Belongs to Ubiquitin conjugating enzyme family. Gene expression is developmentally regulated. | 0 |
| RefSeq | XP_021848483.1 | ubiquitin-conjugating enzyme E2-23 kDa-like [Spinacia oleracea] | 0 |
| P42748 | Ubiquitin-conjugating enzyme E2 4 OS=Arabidopsis thaliana OX=3702 GN=UBC4 PE=2 SV=2 | 0 | |
| TrEMBL | A0A0K9QIW6 | UBC core domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_174190 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology