Basic Information
Locus ID:
gene_10889
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
lysM domain receptor-like kinase 4
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr07 | 84538574 | 84541051 | - | gene_10889 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.63 | 75,913.48 Da | 35.16 | 87.09 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01476 | LysM domain | 201 | 242 | 0.0023 | IPR018392 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 413 | 665 | 9.2E-37 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 357 | 665 | 2.95E-60 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 359 | 450 | 1.3E-14 | - |
| Gene3D | G3DSA:3.10.350.10 | LysM domain | 195 | 249 | 3.4E-5 | IPR036779 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 452 | 681 | 6.8E-49 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 366 | 675 | 30.053843 | IPR000719 |
| ProSiteProfiles | PS51782 | LysM domain profile. | 197 | 241 | 9.461521 | IPR018392 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 316 | 355 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 339 | 355 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G33580.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_022718676.1 | protein LYK5-like [Durio zibethinus] | 0 |
| O22808 | Protein LYK5 OS=Arabidopsis thaliana OX=3702 GN=LYK5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8J4V4D1 | Protein LYK5-like OS=Castanea mollissima OX=60419 GN=CMV_029169 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology