HalophFGD

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Basic Information
Locus ID: gene_10790
Species & Taxonomic ID: Mesembryanthemum crystallinum & 3544
Genome Assembly: Koichi Toyokura Assembly
Description: F-box protein At3g07870-like
Maps and Mapping Data
Chromosome Start End Strand ID
Super-Scaffold_8_Chr_3 4569072 4571735 + gene_10790
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.75 51,762.03 Da 40.47 95.71 -0.17
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
SUPERFAMILY SSF81383 F-box domain 18 97 7.72E-11 IPR036047
TIGRFAM TIGR01640 F_box_assoc_1: F-box protein interaction domain 165 382 1.4E-11 IPR017451
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
TAIR AT3G06240.1 F-box family protein. 0
RefSeq XP_021753700.1 F-box/kelch-repeat protein At3g23880-like [Chenopodium quinoa] 0
Swiss-Prot Q8GXC7 F-box/kelch-repeat protein At3g06240 OS=Arabidopsis thaliana OX=3702 GN=At3g06240 PE=2 SV=1 0
TrEMBL A0A0J8B5Z1 F-box domain-containing protein OS=Beta vulgaris subsp. vulgaris OX=3555 GN=BVRB_9g225210 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Aizoaceae Mesembryanthemum crystallinum 8 gene_10790, gene_15721, gene_16719, gene_16720, gene_16746 ...
gene_1909, gene_23270, gene_23976
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.