Basic Information
Locus ID:
gene_10751
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
Belongs to the helicase family. RecQ subfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr07 | 68797353 | 68809515 | - | gene_10751 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.61 | 68,029.81 Da | 51.11 | 78.79 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17920 | DEXHc_RecQ | 198 | 395 | 1.57288E-96 | - |
| CDD | cd18794 | SF2_C_RecQ | 396 | 529 | 1.52813E-65 | - |
| Pfam | PF00270 | DEAD/DEAH box helicase | 206 | 375 | 1.2E-16 | IPR011545 |
| Pfam | PF00271 | Helicase conserved C-terminal domain | 412 | 519 | 6.6E-17 | IPR001650 |
| Pfam | PF16124 | RecQ zinc-binding | 533 | 600 | 2.2E-13 | IPR032284 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 243 | 540 | 2.67E-51 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 169 | 395 | 5.4E-83 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 396 | 603 | 4.0E-61 | IPR027417 |
| SMART | SM00487 | ultradead3 | 200 | 404 | 3.9E-27 | IPR014001 |
| SMART | SM00490 | helicmild6 | 438 | 520 | 6.0E-23 | IPR001650 |
| TIGRFAM | TIGR00614 | recQ_fam: ATP-dependent DNA helicase, RecQ family | 198 | 603 | 7.6E-151 | IPR004589 |
| ProSiteProfiles | PS51192 | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 212 | 388 | 19.588089 | IPR014001 |
| ProSiteProfiles | PS51194 | Superfamilies 1 and 2 helicase C-terminal domain profile. | 410 | 563 | 18.700043 | IPR001650 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G05740.1 | RECQ helicase l1. | 0 |
| RefSeq | XP_031269491.1 | ATP-dependent DNA helicase Q-like 1 [Pistacia vera] | 0 |
| Q9FT74 | ATP-dependent DNA helicase Q-like 1 OS=Arabidopsis thaliana OX=3702 GN=RECQL1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J5B6H2 | ATP-dependent DNA helicase OS=Nyssa sinensis OX=561372 GN=F0562_029249 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology