Basic Information
Locus ID:
gene_10660
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
PB1 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_8_Chr_3 | 2109439 | 2115797 | + | gene_10660 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.35 | 101,863.58 Da | 43.50 | 76.39 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 650 | 907 | 1.47284E-107 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 644 | 907 | 1.2E-63 | IPR001245 |
| Pfam | PF00564 | PB1 domain | 29 | 117 | 1.9E-10 | IPR000270 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 28 | 122 | 1.77E-10 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 631 | 905 | 1.66E-77 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 630 | 729 | 7.9E-25 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 730 | 916 | 1.0E-55 | - |
| SMART | SM00220 | serkin_6 | 644 | 910 | 1.2E-54 | IPR000719 |
| SMART | SM00666 | PB1_new | 27 | 119 | 6.3E-17 | IPR000270 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 644 | 914 | 40.993561 | IPR000719 |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 27 | 119 | 12.13097 | IPR000270 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 769 | 781 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 650 | 672 | - | IPR017441 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 834 | 856 | 3.6E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 763 | 781 | 3.6E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 878 | 900 | 3.6E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 726 | 739 | 3.6E-15 | IPR001245 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G57610.1 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain. | 0 |
| RefSeq | XP_021858405.1 | uncharacterized protein LOC110797601 [Spinacia oleracea] | 0 |
| A0A2R6XIK6 | RAF-like serine/threonine-protein kinase PRAF OS=Marchantia polymorpha OX=3197 GN=PRAF PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9QJY8 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_176870 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology