Basic Information
Locus ID:
gene_10627
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Short Name:
SOS2
Description:
Non-specific serine threonine protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_8_Chr_3 | 1589479 | 1597467 | + | gene_10627 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.54 | 50,295.51 Da | 38.12 | 92.60 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd12195 | CIPK_C | 310 | 420 | 3.60642E-46 | - |
| Pfam | PF00069 | Protein kinase domain | 10 | 263 | 1.3E-73 | IPR000719 |
| Pfam | PF03822 | NAF domain | 306 | 365 | 3.6E-19 | IPR004041 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 6 | 264 | 8.36E-91 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 91 | 271 | 5.6E-61 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 2 | 89 | 2.9E-31 | - |
| Gene3D | G3DSA:3.30.310.80 | Kinase associated domain 1, KA1 | 303 | 429 | 1.0E-51 | - |
| SMART | SM00220 | serkin_6 | 10 | 263 | 2.9E-105 | IPR000719 |
| ProSiteProfiles | PS50816 | NAF domain profile. | 304 | 328 | 12.095635 | IPR018451 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 10 | 263 | 51.636463 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 129 | 141 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 16 | 48 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
ko04068 (FoxO signaling pathway)
map04068 (FoxO signaling pathway)
ko04140 (Autophagy - animal)
map04140 (Autophagy - animal)
ko04150 (mTOR signaling pathway)
map04150 (mTOR signaling pathway)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04152 (AMPK signaling pathway)
map04152 (AMPK signaling pathway)
ko04211 (Longevity regulating pathway)
map04211 (Longevity regulating pathway)
ko04213 (Longevity regulating pathway - multiple species)
map04213 (Longevity regulating pathway - multiple species)
ko04371 (Apelin signaling pathway)
map04371 (Apelin signaling pathway)
ko04710 (Circadian rhythm)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G35410.1 | Protein kinase superfamily protein. encodes a member of the CBL-interacting protein kinase family, is a regulatory component controlling plant potassium nutrition | 0 |
| RefSeq | XP_021760793.1 | CBL-interacting serine/threonine-protein kinase 24-like isoform X1 [Chenopodium quinoa] | 0 |
| Q9LDI3 | CBL-interacting serine/threonine-protein kinase 24 OS=Arabidopsis thaliana OX=3702 GN=CIPK24 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9QYQ9 | non-specific serine/threonine protein kinase OS=Spinacia oleracea OX=3562 GN=SOVF_131470 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology