Basic Information
Locus ID:
gene_10534
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_8_Chr_3 | 43597786 | 43603024 | - | gene_10534 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.10 | 67,101.38 Da | 41.43 | 81.76 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 152 | 471 | 7.2E-76 | IPR000490 |
| Pfam | PF07983 | X8 domain | 486 | 557 | 9.1E-19 | IPR012946 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 152 | 472 | 2.52E-80 | IPR017853 |
| Gene3D | G3DSA:1.20.58.1040 | - | 481 | 578 | 4.1E-9 | - |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 151 | 478 | 9.8E-111 | - |
| SMART | SM00768 | X8_cls | 485 | 570 | 5.0E-44 | IPR012946 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13560.1 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_021771931.1 | glucan endo-1,3-beta-glucosidase 4-like [Chenopodium quinoa] | 0 |
| Q94CD8 | Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana OX=3702 GN=At3g13560 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9RV46 | X8 domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_032040 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology