Basic Information
Locus ID:
gene_10348
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_8_Chr_3 | 40907666 | 40911781 | - | gene_10348 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.24 | 112,852.16 Da | 29.15 | 100.67 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 81 | 137 | 1.0E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 415 | 474 | 1.5E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 486 | 546 | 1.4E-10 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 552 | 594 | 2.6E-7 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 294 | 309 | 0.45 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 33 | 75 | 1.3E-10 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 715 | 989 | 3.6E-47 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 80 | 192 | 4.56E-23 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 166 | 498 | 1.63E-62 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 463 | 617 | 2.49E-33 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 713 | 997 | 2.32E-70 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 703 | 792 | 4.6E-19 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 229 | 385 | 5.3E-55 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 150 | 218 | 2.4E-14 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 793 | 1009 | 2.4E-59 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 34 | 149 | 1.2E-29 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 386 | 627 | 1.6E-65 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 125 | 149 | 200.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 557 | 581 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 437 | 460 | 18.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 101 | 124 | 41.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 197 | 221 | 46.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 509 | 532 | 280.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 713 | 992 | 8.8E-37 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 293 | 317 | 81.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 295 | 318 | 7.157505 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 713 | 999 | 38.421173 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 719 | 743 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 842 | 854 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 512 | 525 | 4.5E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 557 | 570 | 4.5E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G08590.1 | Leucine-rich receptor-like protein kinase family protein. similar to CLV1-like leucine rich repeat transmembrane receptor-like protein kinase (Ipomoea nil) (U77888) | 0 |
| RefSeq | XP_019104470.1 | MDIS1-interacting receptor like kinase 1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9FRS6 | Leucine-rich repeat receptor-like protein kinase PXL1 OS=Arabidopsis thaliana OX=3702 GN=PXL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9QDZ4 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_189850 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology