Basic Information
Locus ID:
gene_10313
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
transcription factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_8_Chr_3 | 40287697 | 40290601 | - | gene_10313 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.93 | 30,587.00 Da | 53.18 | 91.86 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14144 | Seed dormancy control | 28 | 102 | 1.5E-28 | IPR025422 |
| ProSiteProfiles | PS51806 | DOG1 domain profile. | 10 | 260 | 34.166775 | IPR025422 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 178 | 192 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 178 | 198 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G14880.2 | 0 | |
| RefSeq | XP_021863797.1 | protein DOG1-like 3 [Spinacia oleracea] | 0 |
| Q9SN45 | Protein DOG1-like 2 OS=Arabidopsis thaliana OX=3702 GN=DOGL2 PE=4 SV=2 | 0 | |
| TrEMBL | A0A7C9EZX8 | DOG1 domain-containing protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology