Basic Information
Locus ID:
gene_10199
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
Zinc finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr07 | 91923072 | 91931260 | + | gene_10199 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.50 | 60,212.99 Da | 47.78 | 69.21 | -0.66 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00641 | Zn-finger in Ran binding protein and others | 357 | 379 | 8.7E-8 | IPR001876 |
| Pfam | PF00641 | Zn-finger in Ran binding protein and others | 322 | 345 | 1.5E-6 | IPR001876 |
| Pfam | PF00641 | Zn-finger in Ran binding protein and others | 278 | 301 | 1.6E-6 | IPR001876 |
| SUPERFAMILY | SSF90209 | Ran binding protein zinc finger-like | 317 | 348 | 2.55E-6 | IPR036443 |
| SUPERFAMILY | SSF90209 | Ran binding protein zinc finger-like | 353 | 385 | 7.06E-6 | IPR036443 |
| SUPERFAMILY | SSF90209 | Ran binding protein zinc finger-like | 272 | 303 | 7.69E-6 | IPR036443 |
| Gene3D | G3DSA:4.10.1060.10 | - | 314 | 351 | 6.6E-13 | - |
| Gene3D | G3DSA:4.10.1060.10 | - | 270 | 304 | 6.4E-12 | - |
| Gene3D | G3DSA:4.10.1060.10 | - | 352 | 385 | 1.5E-10 | - |
| SMART | SM00547 | zf_4 | 324 | 348 | 1.8E-5 | IPR001876 |
| SMART | SM00547 | zf_4 | 280 | 304 | 3.4E-7 | IPR001876 |
| SMART | SM00547 | zf_4 | 357 | 381 | 1.0E-5 | IPR001876 |
| ProSiteProfiles | PS50199 | Zinc finger RanBP2 type profile. | 322 | 351 | 9.585588 | IPR001876 |
| ProSiteProfiles | PS50199 | Zinc finger RanBP2 type profile. | 355 | 384 | 9.709803 | IPR001876 |
| ProSiteProfiles | PS50199 | Zinc finger RanBP2 type profile. | 278 | 307 | 9.80014 | IPR001876 |
| ProSitePatterns | PS01358 | Zinc finger RanBP2-type signature. | 359 | 378 | - | IPR001876 |
| ProSitePatterns | PS01358 | Zinc finger RanBP2-type signature. | 282 | 301 | - | IPR001876 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 488 | 511 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 387 | 427 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 387 | 409 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 488 | 505 | - | - |
| Coils | Coil | Coil | 228 | 248 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G70650.1 | Ran BP2/NZF zinc finger-like superfamily protein. | 0 |
| RefSeq | XP_023910999.1 | uncharacterized protein LOC112022607 [Quercus suber] | 0 |
| TrEMBL | A0A8J4S193 | Zinc finger protein VAR3, chloroplastic OS=Castanea mollissima OX=60419 GN=CMV_000428 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology