Basic Information
Locus ID:
gene_10156
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
inositol 1,4,5-trisphosphate 5-phosphatase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_8_Chr_3 | 37858570 | 37870358 | - | gene_10156 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.56 | 119,127.98 Da | 42.36 | 81.25 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09074 | INPP5c | 524 | 867 | 1.04389E-99 | - |
| Pfam | PF03372 | Endonuclease/Exonuclease/phosphatase family | 529 | 858 | 1.3E-12 | IPR005135 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 155 | 503 | 5.49E-24 | IPR036322 |
| SUPERFAMILY | SSF56219 | DNase I-like | 501 | 887 | 5.63E-59 | IPR036691 |
| Gene3D | G3DSA:2.130.10.10 | - | 11 | 267 | 2.6E-8 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 274 | 505 | 2.1E-6 | IPR015943 |
| Gene3D | G3DSA:3.60.10.10 | Endonuclease/exonuclease/phosphatase | 506 | 895 | 6.0E-102 | IPR036691 |
| SMART | SM00320 | WD40_4 | 202 | 240 | 0.9 | IPR001680 |
| SMART | SM00320 | WD40_4 | 147 | 188 | 2.2 | IPR001680 |
| SMART | SM00320 | WD40_4 | 459 | 496 | 79.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 420 | 457 | 200.0 | IPR001680 |
| SMART | SM00128 | i5p_5 | 522 | 873 | 1.1E-96 | IPR000300 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 38 | 53 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 13 | 54 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G65580.1 | Endonuclease/exonuclease/phosphatase family protein. | 0 |
| RefSeq | XP_010673850.1 | type II inositol polyphosphate 5-phosphatase 15 isoform X2 [Beta vulgaris subsp. vulgaris] | 0 |
| Q84W55 | Type II inositol polyphosphate 5-phosphatase 15 OS=Arabidopsis thaliana OX=3702 GN=IP5P15 PE=1 SV=2 | 0 | |
| TrEMBL | A0A0K9R9U5 | IPPc domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_090830 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology