Basic Information
Locus ID:
gene_10080
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Short Name:
IAA16
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_8_Chr_3 | 36771834 | 36775389 | - | gene_10080 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.59 | 30,014.64 Da | 31.15 | 70.86 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02309 | AUX/IAA family | 17 | 271 | 1.9E-89 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 158 | 261 | 5.04E-22 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 158 | 274 | 2.3E-43 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 162 | 262 | 25.000959 | IPR000270 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 25 | 50 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G04730.1 | indoleacetic acid-induced protein 16. early auxin-induced (IAA16) | 0 |
| RefSeq | XP_021773140.1 | auxin-responsive protein IAA16-like [Chenopodium quinoa] | 0 |
| O24407 | Auxin-responsive protein IAA16 OS=Arabidopsis thaliana OX=3702 GN=IAA16 PE=1 SV=1 | 0 | |
| TrEMBL | A0A067JIG3 | Auxin-responsive protein OS=Jatropha curcas OX=180498 GN=JCGZ_23500 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology