halophFGD

Basic Information

Locus ID: gene_1001

Species & Taxonomic ID: Mesembryanthemum crystallinum & 3544

Genome Assembly: Koichi Toyokura Assembly

Description: wall-associated receptor kinase-like

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
Super-Scaffold_2_Chr_2	31472208	31496306	-	gene_1001

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
7.51	41,794.10 Da	29.00	75.55	-0.16

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF00069	Protein kinase domain	186	372	8.6E-34	IPR000719
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	165	372	5.53E-63	IPR011009
Gene3D	G3DSA:3.30.200.20	Phosphorylase Kinase; domain 1	159	247	6.5E-19	-
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	248	373	8.3E-45	-
SMART	SM00220	serkin_6	186	373	3.5E-11	IPR000719
ProSiteProfiles	PS50011	Protein kinase domain profile.	186	373	30.718142	IPR000719
ProSitePatterns	PS00108	Serine/Threonine protein kinases active-site signature.	293	305	-	IPR008271

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

KEGG Pathway

KO Term:

K04733 (interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1])

Pathway:

ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) map04621 (NOD-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)

Best hit

Source	Best Hit ID	Description
TAIR	AT1G16150.1	wall associated kinase-like 4. Encodes a cell-wall associated kinase like protein of the receptor-like kinase (RLK) superfamily. Likely involved in Arabidopsis root mineral responses to Zn2+, Cu2+, K+, Na+ and Ni+.
RefSeq	XP_010680291.2	wall-associated receptor kinase-like 5 isoform X1 [Beta vulgaris subsp. vulgaris]
Swiss-Prot	Q9S9M2	Wall-associated receptor kinase-like 4 OS=Arabidopsis thaliana OX=3702 GN=WAKL4 PE=2 SV=2
TrEMBL	A0A7C8ZM39	Protein kinase domain-containing protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Aizoaceae	Mesembryanthemum crystallinum	8	gene_1001, gene_22879, gene_22881, gene_22883, gene_22885 ... gene_22886, gene_22887, gene_22888