Basic Information
Locus ID:
gene_0
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Short Name:
CBL02
Description:
Calcineurin B-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_2_Chr_2 | 41370 | 58116 | - | gene_0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.14 | 31,641.73 Da | 39.80 | 94.69 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13833 | EF-hand domain pair | 115 | 160 | 5.2E-4 | IPR002048 |
| Pfam | PF13202 | EF hand | 219 | 243 | 3.0E-8 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 84 | 269 | 3.57E-47 | IPR011992 |
| Gene3D | G3DSA:1.10.238.10 | - | 83 | 277 | 2.2E-72 | - |
| SMART | SM00054 | efh_1 | 218 | 246 | 0.4 | IPR002048 |
| SMART | SM00054 | efh_1 | 137 | 165 | 0.6 | IPR002048 |
| SMART | SM00054 | efh_1 | 174 | 202 | 8.2 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 214 | 249 | 11.640179 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 133 | 168 | 12.644413 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 170 | 205 | 10.273304 | IPR002048 |
| PRINTS | PR00450 | Recoverin family signature | 234 | 254 | 2.7E-6 | - |
| PRINTS | PR00450 | Recoverin family signature | 141 | 162 | 2.7E-6 | - |
| PRINTS | PR00450 | Recoverin family signature | 188 | 206 | 2.7E-6 | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
ko04010 (MAPK signaling pathway)
map04010 (MAPK signaling pathway)
ko04020 (Calcium signaling pathway)
map04020 (Calcium signaling pathway)
ko04022 (cGMP-PKG signaling pathway)
map04022 (cGMP-PKG signaling pathway)
ko04114 (Oocyte meiosis)
map04114 (Oocyte meiosis)
ko04218 (Cellular senescence)
map04218 (Cellular senescence)
ko04310 (Wnt signaling pathway)
map04310 (Wnt signaling pathway)
ko04370 (VEGF signaling pathway)
map04370 (VEGF signaling pathway)
map04650 (Natural killer cell mediated cytotoxicity)
map04658 (Th1 and Th2 cell differentiation)
map04659 (Th17 cell differentiation)
map04660 (T cell receptor signaling pathway)
map04662 (B cell receptor signaling pathway)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G26570.1 | calcineurin B-like 3. member of AtCBLs (Calcineurin B-like Calcium Sensor Proteins) | 0 |
| RefSeq | XP_034898269.1 | calcineurin B-like protein 3 isoform X1 [Populus alba] | 0 |
| Q75LU8 | Calcineurin B-like protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=CBL3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A836YFC0 | Calcineurin B-like protein OS=Salix suchowensis OX=1278906 GN=IMY05_001G0002400 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology