Basic Information
Locus ID:
gene.Thate09g21320
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
Homocysteine s-methyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr09 | 256889555 | 256920612 | + | gene.Thate09g21320 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.46 | 18,584.23 Da | 45.55 | 86.93 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02574 | Homocysteine S-methyltransferase | 25 | 163 | 7.2E-29 | IPR003726 |
| SUPERFAMILY | SSF82282 | Homocysteine S-methyltransferase | 25 | 165 | 3.66E-34 | IPR036589 |
| Gene3D | G3DSA:3.20.20.330 | - | 10 | 162 | 1.2E-36 | IPR036589 |
| ProSiteProfiles | PS50970 | Homocysteine-binding domain profile. | 1 | 163 | 21.076611 | IPR003726 |
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G25900.1 | Homocysteine S-methyltransferase family protein. | 0 |
| RefSeq | XP_004985165.1 | homocysteine S-methyltransferase 1 [Setaria italica] | 0 |
| Q9FUN0 | Homocysteine S-methyltransferase 1 OS=Zea mays OX=4577 GN=HMT-1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A843UFI7 | Hcy-binding domain-containing protein OS=Colocasia esculenta OX=4460 GN=Taro_017125 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology