HalophFGD

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Basic Information
Locus ID: gene.Thate09g21080
Species & Taxonomic ID: Thalassia testudinum & 55497
Genome Assembly: GCA_037157565.1
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
Chr09 248337369 248338701 + gene.Thate09g21080
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.08 27,317.38 Da 50.03 61.13 -0.61
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
SUPERFAMILY SSF57756 Retrovirus zinc finger-like domains 31 73 8.07E-7 IPR036875
Gene3D G3DSA:4.10.60.10 - 33 82 1.3E-6 -
SMART SM00343 c2hcfinal6 56 72 0.14 IPR001878
SMART SM00343 c2hcfinal6 37 53 1.3 IPR001878
Gene Ontology
Molecular Function:
GO:0003676 (nucleic acid binding) GO:0008270 (zinc ion binding)
Best hit
Source Best Hit ID Description E-value
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Hydrocharitaceae Thalassia testudinum 12 gene.Thate01g12700, gene.Thate01g16320, gene.Thate01g21130 ...
gene.Thate02g14490, gene.Thate02g36780, gene.Thate03g01690, gene.Thate03g10890, gene.Thate04g00930, gene.Thate04g12660, gene.Thate04g17570, gene.Thate06g22780, gene.Thate09g21080
Poaceae Zoysia macrostachya 1 Zma_g25383
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.