Basic Information
Locus ID:
gene.Thate09g20290
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
Heterogeneous nuclear ribonucleoprotein U-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr09 | 227184650 | 227195051 | - | gene.Thate09g20290 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.86 | 36,456.66 Da | 42.37 | 114.32 | 0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 108 | 159 | 3.7E-8 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 33 | 81 | 2.24E-9 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 80 | 159 | 5.66E-16 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 92 | 172 | 6.0E-15 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 23 | 91 | 1.2E-10 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 331 | 10.67613 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 110 | 122 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G47090.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_038715070.1 | LRR receptor-like serine/threonine-protein kinase EFR [Tripterygium wilfordii] | 0 |
| C0LGP4 | Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidopsis thaliana OX=3702 GN=At3g47570 PE=2 SV=1 | 0 | |
| TrEMBL | A0A067KRM5 | Protein kinase domain-containing protein OS=Jatropha curcas OX=180498 GN=JCGZ_05023 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 2 | pistato.v30130370, pistato.v30130410 |
| Hydrocharitaceae | Thalassia testudinum | 2 | gene.Thate01g11410, gene.Thate09g20290 |