Basic Information
Locus ID:
gene.Thate09g15890
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
proteinaceous RNase P 1, chloroplastic mitochondrial-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr09 | 108910106 | 109040415 | - | gene.Thate09g15890 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.75 | 90,513.34 Da | 49.37 | 75.18 | -0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF16953 | Protein-only RNase P | 502 | 727 | 1.1E-67 | IPR031595 |
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 189 | 247 | 1.1E-16 | IPR033443 |
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 315 | 459 | 1.2E-49 | IPR033443 |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 312 | 730 | 1.4E-188 | IPR011990 |
| Gene3D | G3DSA:3.40.50.11980 | - | 519 | 693 | 1.4E-188 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 282 | 298 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 255 | 275 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 255 | 299 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 738 | 778 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 60 | 164 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 753 | 778 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 94 | 117 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G32230.1 | proteinaceous RNase P 1. RNase P able to cleave tRNA-like structures involved in the maturation of plant mitochondrial mRNAs. | 0 |
| RefSeq | XP_020245596.1 | proteinaceous RNase P 1, chloroplastic/mitochondrial-like isoform X1 [Asparagus officinalis] | 0 |
| Q66GI4 | Proteinaceous RNase P 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PRORP1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5P1FTA2 | ribonuclease P OS=Asparagus officinalis OX=4686 GN=A4U43_C01F15440 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology