Basic Information
Locus ID:
gene.Thate09g08720
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr09 | 47995963 | 47999551 | - | gene.Thate09g08720 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.24 | 108,430.13 Da | 38.07 | 103.81 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 383 | 442 | 6.8E-8 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 239 | 298 | 1.9E-6 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 114 | 126 | 0.65 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 692 | 971 | 4.4E-43 | IPR000719 |
| Pfam | PF00560 | Leucine Rich Repeat | 142 | 161 | 1.8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 24 | 62 | 9.5E-11 | IPR013210 |
| SUPERFAMILY | SSF52047 | RNI-like | 219 | 582 | 3.22E-66 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 45 | 303 | 7.14E-47 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 681 | 974 | 4.21E-73 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 780 | 984 | 5.5E-59 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 25 | 182 | 1.1E-38 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 333 | 620 | 1.1E-77 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 674 | 779 | 1.2E-23 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 188 | 265 | 3.9E-20 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 266 | 332 | 1.0E-15 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 429 | 453 | 49.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 690 | 974 | 1.5E-35 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 358 | 381 | 230.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 90 | 114 | 16.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 550 | 573 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 501 | 526 | 19.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 285 | 309 | 9.9 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 237 | 261 | 30.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 139 | 163 | 100.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 92 | 114 | 7.396226 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 690 | 975 | 36.640289 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 696 | 719 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 824 | 836 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 723 | 742 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G28440.1 | HAESA-like 1. | 0 |
| RefSeq | XP_010245580.1 | PREDICTED: receptor-like protein kinase HSL1 [Nelumbo nucifera] | 0 |
| Q9SGP2 | Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1U7YYA6 | receptor-like protein kinase HSL1 OS=Nelumbo nucifera OX=4432 GN=LOC104589089 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology