Basic Information
Locus ID:
gene.Thate09g07950
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
phosphatase 2A 55 kDa regulatory subunit B
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr09 | 45107196 | 45133378 | + | gene.Thate09g07950 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.50 | 57,949.44 Da | 37.69 | 82.37 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 27 | 507 | 5.64E-32 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 61 | 512 | 2.0E-22 | IPR015943 |
| SMART | SM00320 | WD40_4 | 476 | 513 | 33.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 383 | 414 | 150.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 19 | 57 | 3.5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 209 | 248 | 0.03 | IPR001680 |
| SMART | SM00320 | WD40_4 | 309 | 356 | 56.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 263 | 299 | 150.0 | IPR001680 |
| PIRSF | PIRSF037309 | PPA2_B55 | 1 | 514 | 4.0E-155 | IPR000009 |
| ProSitePatterns | PS01024 | Protein phosphatase 2A regulatory subunit PR55 signature 1. | 97 | 111 | - | IPR018067 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 276 | 304 | 4.0E-110 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 387 | 413 | 4.0E-110 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 361 | 386 | 4.0E-110 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 305 | 332 | 4.0E-110 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 483 | 512 | 4.0E-110 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 113 | 141 | 4.0E-110 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 248 | 275 | 4.0E-110 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 36 | 56 | 4.0E-110 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 220 | 247 | 4.0E-110 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 333 | 360 | 4.0E-110 | IPR000009 |
Gene Ontology
Molecular Function:
Cellular Component:
KEGG Pathway
Pathway:
ko03015 (mRNA surveillance pathway)
map03015 (mRNA surveillance pathway)
ko04071 (Sphingolipid signaling pathway)
map04071 (Sphingolipid signaling pathway)
ko04111 (Cell cycle - yeast)
map04111 (Cell cycle - yeast)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04152 (AMPK signaling pathway)
map04152 (AMPK signaling pathway)
ko04390 (Hippo signaling pathway)
map04390 (Hippo signaling pathway)
ko04391 (Hippo signaling pathway - fly)
map04391 (Hippo signaling pathway - fly)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G51690.2 | protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform. 55 kDa B regulatory subunit of phosphatase 2A mRNA, | 0 |
| RefSeq | XP_042487144.1 | serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like [Macadamia integrifolia] | 0 |
| A2X2K3 | Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform OS=Oryza sativa subsp. indica OX=39946 GN=OsI_006296 PE=2 SV=2 | 0 | |
| TrEMBL | A0A1D1XIT0 | Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B OS=Anthurium amnicola OX=1678845 GN=PP2AB2_4 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology