Basic Information
Locus ID:
gene.Thate09g07520
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
Jacalin-like lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr09 | 42082083 | 42085536 | + | gene.Thate09g07520 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.75 | 20,013.62 Da | 34.27 | 71.72 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09612 | Jacalin | 29 | 155 | 5.98087E-47 | IPR033734 |
| Pfam | PF01419 | Jacalin-like lectin domain | 29 | 159 | 9.2E-30 | IPR001229 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 19 | 160 | 5.23E-42 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 6 | 158 | 7.6E-52 | IPR036404 |
| SMART | SM00915 | Jacalin_2 | 29 | 160 | 1.4E-31 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 18 | 160 | 45.552715 | IPR001229 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G73040.1 | Mannose-binding lectin superfamily protein. | 0 |
| RefSeq | XP_010924946.1 | jacalin-related lectin 19 isoform X2 [Elaeis guineensis] | 0 |
| Q9SSM3 | Jacalin-related lectin 19 OS=Arabidopsis thaliana OX=3702 GN=JAL19 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6I9RF17 | jacalin-related lectin 19 isoform X2 OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105047632 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology