Basic Information
Locus ID:
gene.Thate09g04500
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
f-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr09 | 23628857 | 23632001 | + | gene.Thate09g04500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 11.45 | 26,124.93 Da | 78.67 | 78.23 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 198 | 230 | 2.2E-4 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 185 | 231 | 1.83E-9 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 190 | 232 | 5.7E-7 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 76 | 133 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 115 | 129 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC103720058, gene-LOC120104557 |
| Cymodoceaceae | Cymodocea nodosa | 3 | gene.Cymno04g18060, gene.Cymno05g00800, gene.Cymno05g00830 |
| Hydrocharitaceae | Thalassia testudinum | 2 | gene.Thate02g14040, gene.Thate09g04500 |
| Posidoniaceae | Posidonia oceanica | 16 | gene.Posoc01g02010, gene.Posoc01g02020, gene.Posoc01g02060 ... |
| Tamaricaceae | Tamarix chinensis | 1 | TC12G1454 |
| Zosteraceae | Zostera marina | 1 | Zosma06g00150.v3.1 |