Basic Information
Locus ID:
gene.Thate09g03970
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
Belongs to the peptidase A1 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr09 | 21256409 | 21257710 | + | gene.Thate09g03970 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.02 | 46,691.22 Da | 44.79 | 84.39 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05476 | pepsin_A_like_plant | 86 | 429 | 6.07649E-71 | IPR034161 |
| Pfam | PF14541 | Xylanase inhibitor C-terminal | 280 | 424 | 1.2E-22 | IPR032799 |
| Pfam | PF14543 | Xylanase inhibitor N-terminal | 87 | 258 | 1.8E-54 | IPR032861 |
| SUPERFAMILY | SSF50630 | Acid proteases | 82 | 430 | 1.02E-87 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 74 | 255 | 3.8E-52 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 256 | 433 | 2.4E-40 | IPR021109 |
| ProSiteProfiles | PS51767 | Peptidase family A1 domain profile. | 87 | 425 | 45.137363 | IPR033121 |
| ProSitePatterns | PS00141 | Eukaryotic and viral aspartyl proteases active site. | 306 | 317 | - | IPR001969 |
| PRINTS | PR00792 | Pepsin (A1) aspartic protease family signature | 306 | 317 | 8.0E-6 | IPR001461 |
| PRINTS | PR00792 | Pepsin (A1) aspartic protease family signature | 401 | 416 | 8.0E-6 | IPR001461 |
| PRINTS | PR00792 | Pepsin (A1) aspartic protease family signature | 93 | 113 | 8.0E-6 | IPR001461 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G33340.1 | Eukaryotic aspartyl protease family protein. Encodes a protein with aspartic protease activity (also known as aspartate-type endopeptidase activity). Overexpression of the gene was shown to lead to salicylic acid (SA)-mediated disease resistance upon exposure to the pathogen Pseudomonas syringae. Moreover, overexpression of this gene led to the upregulation of two pathogenesis-related genes PR1 and PR2. This upregulation was no longer observed in transgenic lines expressing the bacterial NahG gene encoding a hydroxylase suppressing SA accumulation. | 0 |
| RefSeq | XP_010440678.1 | PREDICTED: aspartic proteinase CDR1-like [Camelina sativa] | 0 |
| Q6XBF8 | Aspartic proteinase CDR1 OS=Arabidopsis thaliana OX=3702 GN=CDR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2H9ZRR9 | Aspartic proteinase CDR1 OS=Apostasia shenzhenica OX=1088818 GN=CDR1 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology