Basic Information
Locus ID:
gene.Thate09g03950
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
Belongs to the peptidase A1 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr09 | 21162221 | 21163546 | + | gene.Thate09g03950 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.74 | 47,031.11 Da | 38.31 | 86.92 | 0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05476 | pepsin_A_like_plant | 95 | 438 | 4.7821E-77 | IPR034161 |
| Pfam | PF14541 | Xylanase inhibitor C-terminal | 289 | 434 | 1.7E-23 | IPR032799 |
| Pfam | PF14543 | Xylanase inhibitor N-terminal | 97 | 266 | 2.1E-53 | IPR032861 |
| SUPERFAMILY | SSF50630 | Acid proteases | 87 | 438 | 1.6E-87 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 74 | 265 | 1.8E-51 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 266 | 440 | 5.5E-37 | IPR021109 |
| ProSiteProfiles | PS51767 | Peptidase family A1 domain profile. | 95 | 434 | 37.033058 | IPR033121 |
| ProSitePatterns | PS00141 | Eukaryotic and viral aspartyl proteases active site. | 110 | 121 | - | IPR001969 |
| PRINTS | PR00792 | Pepsin (A1) aspartic protease family signature | 313 | 324 | 7.2E-6 | IPR001461 |
| PRINTS | PR00792 | Pepsin (A1) aspartic protease family signature | 410 | 425 | 7.2E-6 | IPR001461 |
| PRINTS | PR00792 | Pepsin (A1) aspartic protease family signature | 101 | 121 | 7.2E-6 | IPR001461 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G33340.1 | Eukaryotic aspartyl protease family protein. Encodes a protein with aspartic protease activity (also known as aspartate-type endopeptidase activity). Overexpression of the gene was shown to lead to salicylic acid (SA)-mediated disease resistance upon exposure to the pathogen Pseudomonas syringae. Moreover, overexpression of this gene led to the upregulation of two pathogenesis-related genes PR1 and PR2. This upregulation was no longer observed in transgenic lines expressing the bacterial NahG gene encoding a hydroxylase suppressing SA accumulation. | 0 |
| RefSeq | XP_039142392.1 | aspartic proteinase CDR1-like [Dioscorea cayenensis subsp. rotundata] | 0 |
| Q6XBF8 | Aspartic proteinase CDR1 OS=Arabidopsis thaliana OX=3702 GN=CDR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A443NRH0 | Aspartic proteinase CDR1 OS=Cinnamomum micranthum f. kanehirae OX=337451 GN=CKAN_00977600 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology