Basic Information
Locus ID:
gene.Thate09g02960
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
F-Box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr09 | 13498405 | 13499609 | - | gene.Thate09g02960 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.41 | 41,586.75 Da | 39.77 | 89.32 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 36 | 70 | 1.5E-7 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 27 | 96 | 1.07E-11 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 19 | 77 | 5.7E-8 | - |
| SMART | SM00256 | fbox_2 | 40 | 80 | 0.0052 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 34 | 82 | 10.530751 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 16 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 36 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Hydrocharitaceae | Thalassia testudinum | 8 | gene.Thate06g01130, gene.Thate07g15150, gene.Thate07g16180 ... |