Basic Information
Locus ID:
gene.Thate09g01060
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
1-phosphatidylinositol-3-phosphate 5-kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr09 | 4794054 | 4837793 | - | gene.Thate09g01060 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.44 | 203,442.94 Da | 50.12 | 75.48 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd03334 | Fab1_TCP | 387 | 659 | 7.52277E-134 | - |
| CDD | cd17300 | PIPKc_PIKfyve | 1525 | 1769 | 7.41481E-137 | IPR044769 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1564 | 1729 | 2.4E-34 | IPR002498 |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 410 | 655 | 3.0E-29 | IPR002423 |
| Pfam | PF01363 | FYVE zinc finger | 35 | 109 | 9.9E-16 | IPR000306 |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 453 | 625 | 5.23E-40 | IPR027409 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1519 | 1762 | 1.18E-71 | - |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 33 | 114 | 8.15E-19 | IPR011011 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 25 | 121 | 6.7E-20 | IPR013083 |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 452 | 625 | 1.1E-50 | IPR027409 |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1498 | 1645 | 8.9E-37 | IPR027484 |
| Gene3D | G3DSA:3.30.810.10 | - | 1648 | 1772 | 8.9E-33 | - |
| SMART | SM00064 | fyve_4 | 30 | 110 | 5.6E-19 | IPR000306 |
| SMART | SM00330 | PIPK_2 | 1499 | 1774 | 7.1E-104 | IPR002498 |
| ProSiteProfiles | PS50178 | Zinc finger FYVE/FYVE-related type profile. | 38 | 109 | 12.67702 | IPR017455 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1465 | 1784 | 49.629509 | IPR002498 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 840 | 861 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1440 | 1470 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1454 | 1470 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 847 | 861 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G14270.1 | phosphatidylinositol-4-phosphate 5-kinase family protein. Encodes a protein that is predicted to act as a 1-phosphatidylinositol-3-phosphate (PtdIns3P) 5-kinase based on its homology to Fab1 from yeast. It contains an FYVE domain required for binding to PtdIns3P-containing membranes in yeast, as well as a Cpn60_TCP1 homology domain plus a kinase domain. fab1a/fab1b pollen grains not viable and have defective vacuolar organization. | 0 |
| RefSeq | XP_010273819.1 | PREDICTED: 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B [Nelumbo nucifera] | 0 |
| Q9LUM0 | 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B OS=Arabidopsis thaliana OX=3702 GN=FAB1B PE=1 SV=1 | 0 | |
| TrEMBL | A0A822ZXF4 | 1-phosphatidylinositol-3-phosphate 5-kinase OS=Nelumbo nucifera OX=4432 GN=HUJ06_019127 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology