Basic Information
Locus ID:
gene.Thate08g24240
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
domain in TBC and LysM domain containing proteins
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr08 | 382312171 | 382317734 | + | gene.Thate08g24240 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.36 | 31,540.60 Da | 46.21 | 77.19 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07534 | TLD | 184 | 261 | 5.2E-13 | IPR006571 |
| SMART | SM00584 | 109ultra | 158 | 273 | 2.9E-5 | IPR006571 |
| ProSiteProfiles | PS51886 | TLDc domain profile. | 159 | 278 | 17.183151 | IPR006571 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 97 | 125 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 23 | 48 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 97 | 115 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G05590.1 | TLD-domain containing nucleolar protein. | 0 |
| RefSeq | XP_026435732.1 | oxidation resistance protein 1-like [Papaver somniferum] | 0 |
| B4F6Q9 | Oxidation resistance protein 1 OS=Xenopus laevis OX=8355 GN=oxr1 PE=2 SV=2 | 0 | |
| TrEMBL | A0A1D1YSE3 | Oxidation resistance protein 1 (Fragment) OS=Anthurium amnicola OX=1678845 GN=oxr1_3 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology