Basic Information
Locus ID:
gene.Thate08g24000
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr08 | 381045586 | 381051555 | + | gene.Thate08g24000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.83 | 105,307.12 Da | 37.10 | 100.45 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 245 | 303 | 8.8E-7 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 101 | 116 | 0.61 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 690 | 892 | 1.7E-38 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 460 | 519 | 9.1E-9 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 35 | 73 | 1.2E-11 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 282 | 592 | 1.62E-60 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 59 | 356 | 1.87E-58 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 683 | 957 | 6.01E-66 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 665 | 759 | 7.3E-13 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 34 | 186 | 8.4E-44 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 760 | 974 | 2.7E-56 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 291 | 355 | 6.6E-17 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 187 | 285 | 3.3E-31 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 356 | 603 | 1.5E-65 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 482 | 506 | 200.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 100 | 124 | 35.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 435 | 458 | 260.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 314 | 338 | 37.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 688 | 961 | 1.3E-27 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 242 | 265 | 390.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 266 | 290 | 22.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 170 | 194 | 25.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 530 | 554 | 17.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 688 | 964 | 34.859402 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 806 | 818 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 694 | 716 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 966 | 984 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 960 | 984 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G28650.1 | Leucine-rich repeat transmembrane protein kinase family protein. | 0 |
| RefSeq | XP_010936120.1 | MDIS1-interacting receptor like kinase 1 [Elaeis guineensis] | 0 |
| Q9M0G7 | MDIS1-interacting receptor like kinase 1 OS=Arabidopsis thaliana OX=3702 GN=MIK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6I9S2K9 | MDIS1-interacting receptor like kinase 1 OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105055825 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology