Basic Information
Locus ID:
gene.Thate08g21470
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr08 | 363707730 | 363711780 | + | gene.Thate08g21470 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.05 | 107,055.65 Da | 39.27 | 102.45 | 0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 258 | 318 | 6.3E-9 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 696 | 980 | 7.3E-40 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 22 | 60 | 3.5E-5 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 523 | 581 | 2.0E-12 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 323 | 609 | 1.29E-52 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 69 | 391 | 4.79E-62 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 686 | 980 | 2.32E-72 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 676 | 773 | 2.5E-21 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 20 | 302 | 5.8E-71 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 303 | 623 | 3.3E-91 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 774 | 987 | 8.0E-57 | - |
| SMART | SM00369 | LRR_typ_2 | 544 | 567 | 28.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 233 | 257 | 200.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 693 | 980 | 2.4E-33 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 329 | 353 | 16.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 472 | 496 | 43.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 568 | 591 | 37.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 136 | 160 | 130.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 281 | 304 | 9.8 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 693 | 981 | 37.332855 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 818 | 830 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 544 | 557 | 2.7E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 284 | 297 | 2.7E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G75820.1 | Leucine-rich receptor-like protein kinase family protein. Putative receptor kinase with an extracellular leucine-rich domain. Controls shoot and floral meristem size, and contributes to establish and maintain floral meristem identity. Negatively regulated by KAPP (kinase-associated protein phosphatase). CLV3 peptide binds directly CLV1 ectodomain. | 0 |
| RefSeq | XP_021692733.1 | receptor protein kinase CLAVATA1-like [Hevea brasiliensis] | 0 |
| P0DL10 | Leucine-rich repeat receptor-like kinase protein THICK TASSEL DWARF1 OS=Zea mays OX=4577 GN=TD1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A7I8K315 | Protein kinase domain-containing protein OS=Spirodela intermedia OX=51605 GN=SI8410_02002713 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology