Basic Information
Locus ID:
gene.Thate08g20500
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
protein binding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr08 | 358148820 | 358187577 | - | gene.Thate08g20500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.65 | 51,638.10 Da | 47.68 | 80.79 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd07607 | BAR_SH3P_plant | 146 | 355 | 2.35886E-120 | - |
| Pfam | PF14604 | Variant SH3 domain | 405 | 451 | 3.0E-8 | IPR001452 |
| SUPERFAMILY | SSF50044 | SH3-domain | 376 | 457 | 7.09E-15 | IPR036028 |
| SUPERFAMILY | SSF103657 | BAR/IMD domain-like | 145 | 356 | 1.83E-24 | IPR027267 |
| Gene3D | G3DSA:1.20.1270.60 | Arfaptin homology (AH) domain/BAR domain | 143 | 367 | 1.2E-10 | IPR027267 |
| Gene3D | G3DSA:2.30.30.40 | SH3 Domains | 388 | 464 | 1.9E-14 | - |
| SMART | SM00326 | SH3_2 | 400 | 455 | 3.1E-10 | IPR001452 |
| ProSiteProfiles | PS50002 | Src homology 3 (SH3) domain profile. | 397 | 456 | 17.957987 | IPR001452 |
| Coils | Coil | Coil | 284 | 311 | - | - |
| Coils | Coil | Coil | 342 | 362 | - | - |
| Coils | Coil | Coil | 247 | 274 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G34660.1 | SH3 domain-containing protein. | 0 |
| RefSeq | XP_020277352.1 | SH3 domain-containing protein 2 [Asparagus officinalis] | 0 |
| Q8VWF1 | SH3 domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=SH3P2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6I9R8Q3 | SH3 domain-containing protein 2 isoform X2 OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105043505 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology