Basic Information
Locus ID:
gene.Thate08g19500
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr08 | 351080565 | 351084092 | + | gene.Thate08g19500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.36 | 124,567.35 Da | 43.75 | 110.09 | 0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 522 | 581 | 6.1E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 137 | 193 | 3.7E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 255 | 315 | 2.2E-6 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 860 | 1125 | 1.3E-44 | IPR000719 |
| Pfam | PF00560 | Leucine Rich Repeat | 715 | 735 | 0.65 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 90 | 340 | 1.88E-50 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 843 | 1128 | 1.75E-68 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 295 | 469 | 2.04E-32 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 463 | 776 | 1.96E-54 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 818 | 928 | 7.3E-17 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 302 | 472 | 1.8E-50 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 473 | 786 | 1.9E-88 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 198 | 298 | 1.5E-20 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 39 | 197 | 7.0E-39 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 929 | 1133 | 5.7E-53 | - |
| SMART | SM00369 | LRR_typ_2 | 158 | 182 | 16.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 206 | 229 | 33.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 350 | 374 | 120.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 592 | 616 | 210.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 110 | 134 | 37.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 737 | 761 | 210.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 303 | 326 | 350.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 713 | 736 | 65.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 857 | 1129 | 1.1E-35 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 640 | 663 | 44.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 446 | 470 | 29.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 278 | 302 | 37.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 857 | 1133 | 36.668556 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 974 | 986 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 863 | 886 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 619 | 632 | 2.9E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 713 | 726 | 2.9E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G17750.1 | PEP1 receptor 2. Encodes PEPR2, a plasma membrane leucine-rich repeat receptor kinase functioning as a receptor for the Pep1 and Pep2 peptides. Pep1 and Pep2 are amino acids that induce the transcription of defense-related genes. | 0 |
| RefSeq | XP_019702661.1 | receptor-like protein kinase [Elaeis guineensis] | 0 |
| Q9FZ59 | Leucine-rich repeat receptor-like protein kinase PEPR2 OS=Arabidopsis thaliana OX=3702 GN=PEPR2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A443PA63 | Protein kinase domain-containing protein OS=Cinnamomum micranthum f. kanehirae OX=337451 GN=CKAN_01662100 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg2137 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30166990 |
| Arecaceae | Cocos nucifera | 1 | COCNU_10G009110 |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC103711259, gene-LOC120108963 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_04.1110.V1.1 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate08g19500 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG05.1251 |
| Plantaginaceae | Plantago ovata | 2 | Pov_00011074, Pov_00034559 |
| Poaceae | Echinochloa crus-galli | 6 | AH01.2526, AH01.2527, BH01.2855, BH01.2857, CH01.3064 ... |
| Poaceae | Eleusine coracana subsp. coracana | 3 | gene-QOZ80_2AG0120090, gene-QOZ80_2AG0120110 ... |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.2HG0108800.1, HORVU.MOREX.r3.5HG0480440.1 |
| Poaceae | Lolium multiflorum | 3 | gene-QYE76_005384, gene-QYE76_045167, gene-QYE76_045217 |
| Poaceae | Oryza coarctata | 2 | Oco20G001010, Oco20G001020 |
| Poaceae | Oryza sativa | 2 | LOC_Os10g06740.1, LOC_Os10g06760.1 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_01G254700, gene-BS78_01G254800 |
| Poaceae | Puccinellia tenuiflora | 5 | Pt_Chr0301897, Pt_Chr0301916, Pt_Chr0301917, Pt_Chr0701996 ... |
| Poaceae | Sporobolus alterniflorus | 1 | Chr15G016710 |
| Poaceae | Thinopyrum elongatum | 2 | Tel2E01G197400, Tel5E01G350100 |
| Poaceae | Triticum dicoccoides | 3 | gene_TRIDC2AG010300, gene_TRIDC5AG034110 ... |
| Poaceae | Triticum aestivum | 6 | TraesCS2A02G090100.1.cds1, TraesCS2B02G105800.1 ... |
| Poaceae | Zea mays | 2 | Zm00001eb026550_P001, Zm00001eb034800_P002 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-42998 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g13073 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc06g08480 |
| Salicaceae | Populus euphratica | 1 | populus_peu29401 |
| Solanaceae | Lycium barbarum | 3 | gene-LOC132631233, gene-LOC132632151, gene-LOC132632152 |
| Solanaceae | Solanum chilense | 2 | SOLCI004878800, SOLCI004878900 |
| Zosteraceae | Zostera marina | 1 | Zosma01g26240.v3.1 |