Basic Information
Locus ID:
gene.Thate08g18850
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Short Name:
EBF1
Description:
EIN3-binding F-box protein 1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr08 | 348287399 | 348288331 | + | gene.Thate08g18850 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.02 | 34,304.05 Da | 50.68 | 90.36 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 3 | 42 | 1.9E-9 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 85 | 224 | 1.96E-16 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 1 | 38 | 1.44E-10 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 1 | 41 | 1.4E-8 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 81 | 138 | 6.0E-7 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 139 | 236 | 1.8E-12 | IPR032675 |
| SMART | SM00256 | fbox_2 | 7 | 48 | 6.9E-5 | IPR001810 |
| SMART | SM00367 | LRR_CC_2 | 183 | 208 | 41.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 134 | 156 | 200.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 108 | 133 | 73.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 82 | 107 | 230.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 157 | 182 | 23.0 | IPR006553 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 1 | 49 | 8.994076 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 275 | 310 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_010251723.1 | PREDICTED: EIN3-binding F-box protein 1-like [Nelumbo nucifera] | 0 |
| TrEMBL | A0A0K9PR10 | F-box family protein OS=Zostera marina OX=29655 GN=ZOSMA_17G00680 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology